Gene Information

Name : Rpic12D_3055 (Rpic12D_3055)
Accession : YP_002982996.1
Strain :
Genome accession: NC_012856
Putative virulence/resistance : Unknown
Product : Integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2826
EC number : -
Position : 3224782 - 3225852 bp
Length : 1071 bp
Strand : +
Note : PFAM: integrase catalytic region; KEGG: rme:Rmet_6282 integrase, catalytic region

DNA sequence : 
ATGGGACAAAGCTACGAACACCTGAGCGCCGAGGAGCGTGGTGCGATCTTCGCGATGAAGCTGGAGCAGCGAAGCACGCG
GGAGATTGCGCGTGCACTGCAACGCTCAGCCAGCACGATCAGCCGGGAGCTTCGGCGCAACGGCTGGAAACCGGAACAAG
AGCGTGGCCCAATGGGGCGGCCCACGATCGCCGGTGGCTACAATGCGGTGCGCGCCGGTCAGCGGGCCTCCAGATTGCGA
CGCAAGCCCCGTCGTGAGCGCAAGTTGTGCCGACAAGGCAAGCTGTGGCCTGAGGTGCGCCAATACCTGGAGAGACGCTT
CTCGCCAGAGCAGGTGGCTGCACAGCTCAAACGTGTCCATCCCGGCGAACCTGCTTTGAACGTCTCCCACGAAACGATCT
ACCACGCTATTTATGCCGCGCCACGCGGTGCGCTGCGGCGCGAGTTGGTCAGCCTGCTGCGACAGGCGCACGGTGCCCGC
AAGCCTCGCTCGCGCGGGCAGGACCGGCGCGGGCAACTCAACGACATGGTGAGCATTCATGTGCGCCCGCCTGAGGCCAA
CGATCGGCTGATCCCGGGGCACTGGGAGGGTGACCTGATCAAAGGGGCTGGTAACCGCTCGGCAGTCGGTACGCTCATCG
ATCGCAGCACCTTGTTCCTGATGCTGGTGAAGATCGACGGCAGTACCGCCGAGGCCGCCTTGCAGGCCTACAGCGCCGCG
TTCGCGCCCTTGCCCGAGGAGTTGCGCAAGACGCTGACGTACGACCAGGGCAAGGAAATGGCGCTACATCGCAAGCTCGC
CGAGGCGACAGGTATTCGGATCTACTTCTGTGACCCGCACAGCCCCTGGCAGCGCGGCATCTGCGAAAACACCAATGGTC
TGCTGCGCCAGTACTTGCCAAAGGGAGCAGACCTCTCGGTGCTCTCACAGCGTCAGCTTGACGCGATTGCGCTGTCGATG
AACACCCGACCGCGTAAAACACTCGGCTGGCGCACTCCCGCAGAAGCCTTCATTGAGAACTGCGCCAAGCACGGAATCGT
CATTGACCCCGCTGTTGCACTTGGGGCTTGA

Protein sequence : 
MGQSYEHLSAEERGAIFAMKLEQRSTREIARALQRSASTISRELRRNGWKPEQERGPMGRPTIAGGYNAVRAGQRASRLR
RKPRRERKLCRQGKLWPEVRQYLERRFSPEQVAAQLKRVHPGEPALNVSHETIYHAIYAAPRGALRRELVSLLRQAHGAR
KPRSRGQDRRGQLNDMVSIHVRPPEANDRLIPGHWEGDLIKGAGNRSAVGTLIDRSTLFLMLVKIDGSTAEAALQAYSAA
FAPLPEELRKTLTYDQGKEMALHRKLAEATGIRIYFCDPHSPWQRGICENTNGLLRQYLPKGADLSVLSQRQLDAIALSM
NTRPRKTLGWRTPAEAFIENCAKHGIVIDPAVALGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAC39292.1 - Not tested LPA Protein 5e-43 41