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Name : Rpic12D_3054 (Rpic12D_3054) Accession : YP_002982995.1 Strain : Genome accession: NC_012856 Putative virulence/resistance : Virulence Product : general secretion pathway protein F Function : - COG functional category : N : Cell motility COG ID : COG1459 EC number : - Position : 3223065 - 3224276 bp Length : 1212 bp Strand : + Note : TIGRFAM: general secretion pathway protein F; PFAM: type II secretion system protein; KEGG: rso:RSc3116 general secretory pathway F transmembrane protein DNA sequence : ATGCCAGCCTTCCGTTACGAAGCCGCCGACGCCGCCGGCAAGACCGACAAGGGCGTCATCGAAGCCGACAGCGCCCGCCA GGCGCGCACGCTGCTGAGGGCACGCGGGCTGACACCGCTGCTGGTCGACACGCTGGGTGCGCAGGCCACCAAGCGCGGCG GGTCGAGCTTCGGCAAGCGGCTCTCGGCGCAGGAAAACGCACTCGTCACGCGCCAGCTCGCCAGTCTTCTGGTGGCGGGC CTGCCGCTCGATGAAGCGCTGGCCGCGCTGGCCGATCAGGCCGAACGCGCGTACGTCGGCGAACTGCTCGCGGCCATCCG CGCCGAGGTGGTGGGCGGCAGCTCGCTGTCGGTCGCGCTGGCACAGCATCCGAAGGATTTCCCGGATATCTACCGCGCCC TCGTTTCAGCGGGCGAACACTCCGGCAACCTCGGCCTCGTCCTTTCACGCCTGGCCGACTACATCGAGAGCCGCAACGCG CTCACATCGAAGATCAAGCTGGCCTTCACGTACCCCGCCATCGTCACGGTGGTGGCGTTTGCGATCGTGATCTTCCTGCT GTCATACGTGGTGCCGCAGGTGGTGAGCGTGTTTGCCAACACCAAGCAGAAGCTGCCGACGCTCACGATCATCATGCTGT GGCTGTCGGACTTTGTGCGGAACTGGGGCTGGCTGGCGGCGATCGTGCTGGTAGCGTTGGGCTTGCTGATCCGCAATCTG CTCAAGCAACCGGCGTTGCGGCTGTCGTGGCACAAGTGGCTGCTGACTGCACCGCTGTTCGGCAAGCTCGTCCGCGGTTA CAACACCGCGCGGTTTGCCAGCACGCTGGCGATTCTGACCAGTGCCGGCGTGCCGATCTTGCGTGGGTTGCAGGCTGCGG GGGAAACGCTGAACAACGTTGCGCTCAAGACCAACGTCGAGGATGCATCCACGCGCGTGCGCGAAGGGACTTCGCTGGCG CGGGCGTTGGCAGCGCAGAATCAGTTTCCGCCTGTGCTGGTGCATCTGATCCGCTCGGGTGAGGCGACGGGGAATCTGCC TGCGATGTTGGAGCGGGCTGCGCAGGGCGAGGCGCAGGAGCTTGAGCGCCGGACGTTGTTTCTCACGGGCTTGCTGGAGC CGGCGCTGATTTTGACGATGGGTGTGGTGGTGTTGTTGATTGTGCTGGCGGTGTTGATGCCGATTATTGAGATTAATCAG TTGGTGCACTGA Protein sequence : MPAFRYEAADAAGKTDKGVIEADSARQARTLLRARGLTPLLVDTLGAQATKRGGSSFGKRLSAQENALVTRQLASLLVAG LPLDEALAALADQAERAYVGELLAAIRAEVVGGSSLSVALAQHPKDFPDIYRALVSAGEHSGNLGLVLSRLADYIESRNA LTSKIKLAFTYPAIVTVVAFAIVIFLLSYVVPQVVSVFANTKQKLPTLTIIMLWLSDFVRNWGWLAAIVLVALGLLIRNL LKQPALRLSWHKWLLTAPLFGKLVRGYNTARFASTLAILTSAGVPILRGLQAAGETLNNVALKTNVEDASTRVREGTSLA RALAAQNQFPPVLVHLIRSGEATGNLPAMLERAAQGEAQELERRTLFLTGLLEPALILTMGVVVLLIVLAVLMPIIEINQ LVH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 3e-47 | 42 |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 8e-47 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Rpic12D_3054 | YP_002982995.1 | general secretion pathway protein F | VFG0181 | Protein | 3e-67 | 49 |
