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Name : Rpic12D_3053 (Rpic12D_3053) Accession : YP_002982994.1 Strain : Genome accession: NC_012856 Putative virulence/resistance : Virulence Product : general secretory pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 3221486 - 3223042 bp Length : 1557 bp Strand : + Note : KEGG: rso:RSc3115 general secretion pathway protein E; TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; SMART: AAA ATPase DNA sequence : ATGGCCACGCACGCTTCCACCACCGACGTCAGCACGCTCGAGCCGCCCTCGCAGTCGGCCGTGCGGCTCGTGCCGTATGC GTTTGCGCGCGACGCCAGGTTGCTCGTCGCCCGCCAGGACGTCGACACGCTGGAGGTGTGGGTCTGCCCTGAAACCTCGC GCACGGCGCTGGCTGAACTCGGCCGCGTGTTTGGCGCGCTGCATCTGGTGACGCTCGACACGGCGGCGCTGTCCACCGCC ACGCAGACGGCCTACAACGCGCAAGACGGCAGTGCGGCCCAGGTGGTGGGCGAAGTGGAAGGCGAAGTCGACCTGTCGCG CCTGATGCAGGACATCCCTGCCGTGGAAGACCTGCTCGAATCCGAAGACGACGCGCCGATCATCCGCATGATCAACGCCC TGCTCACGCAGGCCGCGCGCGAAGGCGCCTCGGACATCCATATCGAGCCGTTCGAGAATGCATCCGTCGTGCGCTTTCGT GTCGACGGCACGCTGCGCGACGTCGTGCGCCCGAAGAAAGCGCTGCACGGCGCGCTGATTTCGCGCATCAAGATCATGGC GCAGCTCGACATTGCCGAGAAACGCCTGCCGCAGGACGGGCGCATCACGCTGCGCGTGGGCGGTCGCCCGGTGGACGTGC GTGTGAGCACCCTGCCCACCGGCCACGGCGAACGCGCCGTGCTGCGTCTGCTCGACAAGGAAGCCGGCCGGCTCGACCTG GGCAAGCTCGGCATGGGCGCCGGCACGCTGGCGCGCTTCGATCACCTGATCAACCAGCCGCACGGCATCGTGCTCGTCAC CGGCCCGACGGGTTCGGGCAAGACGACCACGCTGTATGCAGCGCTGTCGCGGCTCGACGCGGCGTCCACCAACATCATGA CGGTGGAAGACCCGATCGAATACGACCTCGACGGCATCGGCCAGACGCAGGTCAATCCGAAGATCGACATGACGTTCGCC AAGGCCCTGCGCGCCATCCTGCGCCAGGACCCGGACGTGGTGATGATCGGGGAAATCCGCGACCTGGAAACCGCGCAGAT TGCGGTGCAGGCCTCGCTGACGGGCCACCTGGTGCTGGCGACGCTGCACACGAATGATTCCGCCTCCGCCGTGACGCGCC TGATCGACATGGGGATCGAACCGTTCCTGCTGTCTTCATCGCTGCTCGGTGTGCTGGCGCAGCGGCTGGTACGCCGCCTG TGCGTGCATTGCCGCCGCGAAGAAGTGCTCGAACTCACGCCTGCAGAAGTGGAAGCCGTGGCCGGCACGCCGATCGCAGA CGGCGTGGCACCGGCGGCACCGGCACGCAAATCGGTCTGGCATCACGTCGGCTGCGAGCGTTGCAGCAACTCCGGCTACC AGGGCCGGACCGGTGTCTACGAACTGCTGACCGTCACACCCGAAATTCAGACGATGATCCACCGCCAGGCCGCTGAATCC GAGATCAAGGCGTTCGCCATCGGCCAGGGCATGCAGACCATGCGCATGGATGCCCAGCGCTGGATCGACACGGGCGCTAC GTCGCTGGAAGAAGTGCTGCGGGTCACACGCGACTAA Protein sequence : MATHASTTDVSTLEPPSQSAVRLVPYAFARDARLLVARQDVDTLEVWVCPETSRTALAELGRVFGALHLVTLDTAALSTA TQTAYNAQDGSAAQVVGEVEGEVDLSRLMQDIPAVEDLLESEDDAPIIRMINALLTQAAREGASDIHIEPFENASVVRFR VDGTLRDVVRPKKALHGALISRIKIMAQLDIAEKRLPQDGRITLRVGGRPVDVRVSTLPTGHGERAVLRLLDKEAGRLDL GKLGMGAGTLARFDHLINQPHGIVLVTGPTGSGKTTTLYAALSRLDAASTNIMTVEDPIEYDLDGIGQTQVNPKIDMTFA KALRAILRQDPDVVMIGEIRDLETAQIAVQASLTGHLVLATLHTNDSASAVTRLIDMGIEPFLLSSSLLGVLAQRLVRRL CVHCRREEVLELTPAEVEAVAGTPIADGVAPAAPARKSVWHHVGCERCSNSGYQGRTGVYELLTVTPEIQTMIHRQAAES EIKAFAIGQGMQTMRMDAQRWIDTGATSLEEVLRVTRD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 1e-106 | 50 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 8e-107 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Rpic12D_3053 | YP_002982994.1 | general secretory pathway protein E | VFG0182 | Protein | 2e-116 | 54 |
| Rpic12D_3053 | YP_002982994.1 | general secretory pathway protein E | VFG1876 | Protein | 2e-109 | 52 |
| Rpic12D_3053 | YP_002982994.1 | general secretory pathway protein E | VFG2048 | Protein | 5e-107 | 50 |
| Rpic12D_3053 | YP_002982994.1 | general secretory pathway protein E | VFG0233 | Protein | 9e-80 | 47 |
| Rpic12D_3053 | YP_002982994.1 | general secretory pathway protein E | VFG0112 | Protein | 4e-76 | 45 |
| Rpic12D_3053 | YP_002982994.1 | general secretory pathway protein E | VFG2426 | Protein | 1e-68 | 44 |
