Gene Information

Name : Rpic12D_3044 (Rpic12D_3044)
Accession : YP_002982985.1
Strain :
Genome accession: NC_012856
Putative virulence/resistance : Virulence
Product : general secretion pathway protein G
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3212788 - 3213267 bp
Length : 480 bp
Strand : +
Note : TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: rso:RSc3106 general secretion pathway G transmembrane protein

DNA sequence : 
ATGATGCAAGGCCAACTTCGCTCTTCCTTCCGCCAGCGCGCCCTCGCCCGGCTGCCCCATCGGGCGGCGCGTGGCTTCAC
CCTGATCGAGATCATGGTGGTGGTGGTGATCCTGGGTATCCTCGCCGCGCTGGTGGTGCCGAAGATCATGAGCCGCCCCG
ACGAGGCGCGCATCATCGCCGCCAAGCAGGACATCGCTTCCATTTCGCAGGCGCTCAAGCTCTATCGGCTAGACAACGGC
CGCTACCCGACCACCGAGCAGGGCATCAGCGCGCTGGTCACCAAACCGACCACCGAGCCGATCCCCAACAACTGGAAAGG
CGGCGGGTATCTGGAACGCCTGCCCAAGGACCCGTGGGGCCATCCGTATCAATATCTGAACCCGGGCGTGCGCGGTGAAG
TGGACGTCTTCAGCTTCGGCGCCGACGGCCAGGCCGGCGGCACCGGCAATGACGCCGATATCGGTAACTGGGACAACTAA

Protein sequence : 
MMQGQLRSSFRQRALARLPHRAARGFTLIEIMVVVVILGILAALVVPKIMSRPDEARIIAAKQDIASISQALKLYRLDNG
RYPTTEQGISALVTKPTTEPIPNNWKGGGYLERLPKDPWGHPYQYLNPGVRGEVDVFSFGADGQAGGTGNDADIGNWDN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 5e-26 52
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 7e-26 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rpic12D_3044 YP_002982985.1 general secretion pathway protein G VFG1871 Protein 2e-34 65
Rpic12D_3044 YP_002982985.1 general secretion pathway protein G VFG0180 Protein 4e-32 61
Rpic12D_3044 YP_002982985.1 general secretion pathway protein G VFG2050 Protein 2e-26 52