Gene Information

Name : Rpic12D_2865 (Rpic12D_2865)
Accession : YP_002982807.1
Strain :
Genome accession: NC_012856
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3022653 - 3023354 bp
Length : 702 bp
Strand : +
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: rso:RSc2935 response regulator transcription regulator protein

DNA sequence : 
ATGCGGATTTTGCTGGTGGAGGATGAGGAAGAATTGGCCGCATGGCTGGCGCGCGCGCTGGCGCAAAGCGGCTTCGTGAT
CGAGCGCGCCGCTGATGGCGTCATCGCCGAAGCCTTCCTGGGCTCCGGAGAATTTGACGCAGTGGTGCTGGACCTGCGCT
TGCCGCGCAAGGATGGCTTTGCCGTGCTGGCCGACATGCGCGCGCGCGACGATCGCACGCCGGTATTGATCCTCACCGCG
CAGGGCGCACTGGATGAACGCGTGCGCGGGCTCAATGCCGGCGCGGACGATTTCCTCACCAAGCCGTTCGCGTTGTCCGA
GCTGGAAGCGAGGTTGATGGCGCTCATCCGCCGCAGCCGCGGCCGGGCGTTTCCGCGTCTGCGTTGCGGGCCCCTGGAGT
TCGACACCGGACGCAAGGCATTCCTGCTGTCGGGCGAGCCGCTGGCGCTCACGCCGCGTGAGCACGCTGCGCTGTCCGCA
CTGCTGCACAAGACCGGCCAGCCGATCAGCAAGGTGCATTTGTTCGACAAGGTCTTCAACCTGGACAGCGATTCGAGCCC
CGACGCGGTGGAGGTGGTCGTGCACCGCCTGCGCAAGAAGCTGGCGGGCACGGGCGTGCAGATCGTCACCGTACGGGGGC
TGGGTTACCTGCTCGAAGCCGGCGATGGTGAAGCGCCCGCCGCCAGCGACAGCAGCGCATGA

Protein sequence : 
MRILLVEDEEELAAWLARALAQSGFVIERAADGVIAEAFLGSGEFDAVVLDLRLPRKDGFAVLADMRARDDRTPVLILTA
QGALDERVRGLNAGADDFLTKPFALSELEARLMALIRRSRGRAFPRLRCGPLEFDTGRKAFLLSGEPLALTPREHAALSA
LLHKTGQPISKVHLFDKVFNLDSDSSPDAVEVVVHRLRKKLAGTGVQIVTVRGLGYLLEAGDGEAPAASDSSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 8e-32 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rpic12D_2865 YP_002982807.1 winged helix family two component transcriptional regulator BAC0487 Protein 3e-35 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rpic12D_2865 YP_002982807.1 winged helix family two component transcriptional regulator VFG0473 Protein 4e-35 41