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Name : Rpic12D_2854 (Rpic12D_2854) Accession : YP_002982796.1 Strain : Genome accession: NC_012856 Putative virulence/resistance : Unknown Product : integrase family protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 3011439 - 3012494 bp Length : 1056 bp Strand : - Note : PFAM: integrase family protein; KEGG: bch:Bcen2424_0446 phage integrase family protein DNA sequence : ATGGCGACCATCGTCAAGACGCCTTCCGGCACGTGGAAGGCGGTCATCCGCAAGATCGGCTGGCCGACCACGGCCAAGAC TTTCCGCACCAAACGCGACGCCGAGGATTGGGCTCGGCGCACCGAGGACGAGATGGTCCGGGGTGTGTATTTGTCCCGTG GGCCGTCTGAGAAGCTGACCGTCGCCGGCGCGTTGAGGCGCTATATGGAGGAGGTTTCGGTCACGAAGAAGCCGACGACA CAGCGCAGCGAGCGCTTCACGGCCCAACACTTGGAAGCCTTCTTCGGGAAGTATTCGATGGCGGCCGTCAGCGCAGACCT GGTCGCCAAGTACCGTGATGTGCGGTTGGCGGCGGGCAAGTCGAACAACACGGTTCGCATTGAACTCGCGATGCTGGGTC ACTTGTTTCGAACGGCGATTCAAGAGTGGAGCATCGGCTTGACGTTCAATCCGGTTGCCAACATTCGCAAGCCTAGTCCG GGGACCGGCCGCGATCGTCGTCTTAGTTTGGACGAGCAGGCGCGTTTATTCGCGGCTGTGTCAGCCCACAGCAATCCGAT GCTGGGTTGGATCGTGGGCTTGGCTGTAGAGACCGGCATGCGGTCATCCGAAATCGCAACGCTACGCCGCTCACAGGTCG ATCTGAACCGTCGAGTTGTGAACTTGCGGGATACGAAAAACGGCTCCGCACGAGTGGTACCACTTACGCGCGCCGCCGCT GATGTGTTGCGACTGGCCCTGAGCAATCCCATTCGTCCATTGGACTCAGACCTCGTGTTCTTTGGGGAGCCAGGGCGCGA CGGGAAACGGCGGCCCTATGTGTTCCAGAAGCTGTGGACGAGCATTGTTCGCGATATAGGCTTGGCCGACCTTCATTTCC ACGATCTCCGTCATGAAGCCGTAAGCCGTCTCGTTGAGGCTGGTCTCAGCGATCAGGAGGTGGCCGCCATAAGCGGGCAC AAGTCCATGCAGATGCTGAAGCGCTACACGCACCTACGGGCTGAGGACTTGGTGGAGAAGCTTGACGCAGTCAATCTTGG CGGTGGTTCTGCCTAG Protein sequence : MATIVKTPSGTWKAVIRKIGWPTTAKTFRTKRDAEDWARRTEDEMVRGVYLSRGPSEKLTVAGALRRYMEEVSVTKKPTT QRSERFTAQHLEAFFGKYSMAAVSADLVAKYRDVRLAAGKSNNTVRIELAMLGHLFRTAIQEWSIGLTFNPVANIRKPSP GTGRDRRLSLDEQARLFAAVSAHSNPMLGWIVGLAVETGMRSSEIATLRRSQVDLNRRVVNLRDTKNGSARVVPLTRAAA DVLRLALSNPIRPLDSDLVFFGEPGRDGKRRPYVFQKLWTSIVRDIGLADLHFHDLRHEAVSRLVEAGLSDQEVAAISGH KSMQMLKRYTHLRAEDLVEKLDAVNLGGGSA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13530.1 | site-specific recombinase | Not tested | PAGI-8 | Protein | 2e-113 | 67 |
| rci | NP_458640.1 | shufflon-specific DNA recombinase | Not tested | SPI-7 | Protein | 2e-39 | 42 |
| rci | NP_807850.1 | shufflon-specific DNA recombinase | Not tested | SPI-7 | Protein | 2e-39 | 42 |
| rci | AAC38070.2 | Rci | Not tested | SPI-7 | Protein | 2e-39 | 42 |
