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Name : Rpic12D_1690 (Rpic12D_1690) Accession : YP_002981645.1 Strain : Genome accession: NC_012856 Putative virulence/resistance : Virulence Product : type VI secretion protein Function : - COG functional category : S : Function unknown COG ID : COG3519 EC number : - Position : 1799756 - 1801636 bp Length : 1881 bp Strand : + Note : TIGRFAM: type VI secretion protein, VC_A0110 family; PFAM: protein of unknown function DUF879; KEGG: cti:RALTA_A0604 replication/virulence associated protein; DUF879 DNA sequence : ATGGACCCGCAACTGCTGGATTACTACAACCGGGAACTGGTCTACATGCGAGAGCTGGCCGGTGAATTCGCCCGGCAGCA CCCGAAGGTGGCCAAGCGCCTTGGCATGCACGGCATCGAGGTGGCGGACCCATATGTGGAACGCCTGATCGAGGCGTTCT GCCTGTTGTCGGCACGCACCCAGATCAAGCTGGATGCGGAGTTCCCGCGCTTCACGCAACGGTTGCTGGAGGTGGTCTAC CCGAACTACGTAGCGCCGACGCCGGCCATTGCGGTGGCGCAGTTCCACCCTAGCCGCACCGAAGGCGATCTAGTGCGCGG GGTTCCGATACCGCGGGACACGGCTTTGCTCGCAAAGGCACCACCTGGCGAATCCACCGAGTGTGAATTCCGCACCACCC AACCGCTGACATTGCGGCCAATCGAGATTGCGGAAGCGCGACTCACAGGCATTCCACCGGACATTCAGGGCTTGGAGCGC TACGTGCCGGCTCAGGTGAGCGTCCAAGGCGCACTGCGCCTGCGGTTACGGCTCACACACGATGTCAAGTTCAGCCAGTT GGCCGGTCTGGATCGCCTGCCCATCTACCTGAGTGGCAATGATCAGATTGCGTCGCACTTGTTCGAGCTGCTTCACAGCG CAGGCTGCGCGACACTCATTGGCAAGCCCGGCGCTATGGGTGAACGTCCAACCGCCGTCACGGACAACGCCGTCAGTCAT GTCGGTATGGCACCCGACGAAGGCGCGTTTCCATTGGCCTGGAACAAGTTCCACGGACACAACCTCGTGCATGAGTACTT TGCGTGCCCGCAGCGCTTTTACTTCTTTGGGCTCAATGGGCTTGCGCGCGGGCTCTCCAAGAATGATGGCCGCGAAGCGG AGATTGTGGTGCTGCTCTCCAAAGCGCCGAGTGCTCTGGTCAGCCAGGTCGATGCCAGCCAGTTCGCGCTGTTCTGCACA CCGGTCATCAACCTCTTCCCGATGCGAACCGATCGGATGGAGGTGAGCCCGGGCCGTACGGAATTCCACCTGGTGGCCGA CCGGAGGCGCCCGCTTGATTTCGAGGTGTTCTCGGTACAGAAGCTCTCGGGCCAAGTGAACGAGCACAGTACGCCGATCG ACTTCCGGCCGCTGTTTGCCACGCTCAACAGCGATGAGGGCAACCATGGCCGGTACTTCTCTGCGCGACGGGAGCCGCGG CTGTTCTCGGATCAGGCACGCAAGTACGGCACCCGCACGGCCTATACGGGCACGGAGGTGTTTCTCTCGCTGGTGGACCA GAACGAAGCGCCCTACCCGAACGACCTGCGTTATCTGTCGGTCGAGGCAATGGTGACCAATCGGGATTTGCCGAATCTGG TGCCGCGCAATGGATTCAGTGATCTGAGCTCACCCGCTTCGATTCCGGTGGAAGGGGTTGGGTTGATCCGTCCGCCATCG GCACCACATGCACCGTTTGCTGAAGGGGAGATGGCCTGGCGGCTGATACGCCAGTTGGGCTTCAACTACCTGTCGCTGAT GGATCTCGACCATCGACAGGGTGGCCAGGGGCTGCGCGACATGCTTCGGCTGTTTGTGTCGGCCAGCGATACCGCCCAGC AGCGGCAGATCGAGAGCCTGATCGGTTCCAAGCTCAAGCCCGTCACACGGCGCATGCCGGGGGCGGGTCCGATTCTGTAC GGCCGTGGCGTGCAGTGTCAGTTGACGGTGGATGAGGCCGGCTTCTCTGGCGTCAGCCCGTACCTGTTTGGCGTGGTGCT GGAACACTTCTTGGCTCGCCATGTGTCGGTCAACGCTTTCACGGAAACCGAGCTGCACGCGATGGAACGCGGTCTGATTC ACCGATGGTCGCCCCGTATGGGTGGCCGCAATGTCATTTAG Protein sequence : MDPQLLDYYNRELVYMRELAGEFARQHPKVAKRLGMHGIEVADPYVERLIEAFCLLSARTQIKLDAEFPRFTQRLLEVVY PNYVAPTPAIAVAQFHPSRTEGDLVRGVPIPRDTALLAKAPPGESTECEFRTTQPLTLRPIEIAEARLTGIPPDIQGLER YVPAQVSVQGALRLRLRLTHDVKFSQLAGLDRLPIYLSGNDQIASHLFELLHSAGCATLIGKPGAMGERPTAVTDNAVSH VGMAPDEGAFPLAWNKFHGHNLVHEYFACPQRFYFFGLNGLARGLSKNDGREAEIVVLLSKAPSALVSQVDASQFALFCT PVINLFPMRTDRMEVSPGRTEFHLVADRRRPLDFEVFSVQKLSGQVNEHSTPIDFRPLFATLNSDEGNHGRYFSARREPR LFSDQARKYGTRTAYTGTEVFLSLVDQNEAPYPNDLRYLSVEAMVTNRDLPNLVPRNGFSDLSSPASIPVEGVGLIRPPS APHAPFAEGEMAWRLIRQLGFNYLSLMDLDHRQGGQGLRDMLRLFVSASDTAQQRQIESLIGSKLKPVTRRMPGAGPILY GRGVQCQLTVDEAGFSGVSPYLFGVVLEHFLARHVSVNAFTETELHAMERGLIHRWSPRMGGRNVI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0289 | NP_454871.1 | hypothetical protein | Not tested | SPI-6 | Protein | 0.0 | 62 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Rpic12D_1690 | YP_002981645.1 | type VI secretion protein | VFG2074 | Protein | 8e-127 | 44 |
