Gene Information

Name : Rpic12D_1630 (Rpic12D_1630)
Accession : YP_002981586.1
Strain :
Genome accession: NC_012856
Putative virulence/resistance : Unknown
Product : 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 1732855 - 1734336 bp
Length : 1482 bp
Strand : -
Note : TIGRFAM: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; PFAM: aldehyde Dehydrogenase; KEGG: bur:Bcep18194_B1781 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase

DNA sequence :
ATGAGCCGCGTCAACATGGACCCAGTCAAGCATTGGATCGACGGCCGCCAGGTCGACAGCGCCGAGCGTTTCGTCACGAC
CAATCCGGCCACGGGCGAGGCCATTACCGAAGTGGCATCGGGCGGTGAGGCGGAGATCAACGCGGCGGTAGCGGCGGCCA
AGGCGGCATTTCCGGCCTGGGCCAACACGCCGGCCAAGCAGCGCGCCAAGCTGATGCGCCGACTCGGCGAGCTGATTGAG
CAGAACGTGCCGCACCTGGCGGCGCTGGAGACGATGGATACTGGCCTGCCGATCGCGCAGACGAGCAAGCAGCTCATTCC
GCGCGCTTCCGAGAACTTCCATTTCTTCGCCGCGGTGTGCACGCAGGTCAACGGCCGCACGTATCCGGTCGATGACCAGA
TGCTCAACTACACGCTGTATCAGCCGGTGGGCGTTTGCGCGTTGATCTCGCCGTGGAACGTGCCATTCATGACCGCCACC
TGGAAGGTCGCTCCGTGCCTGGCGCTGGGTAATACGGCCGTGCTGAAGATGTCGGAACTGTCGCCGCTGACAGCGGATCA
ACTGGGCCGCCTGGCCCTGGAAGCCGGCATTCCGCCCGGTGTGCTCAACGTGGTGCAAGGCTATGGCGCCACGGCCGGCG
ATGCGCTGGTGCGCCATCCGGATGTGCGGGTGGTGTCGTTCACCGGCGGCACGACGACCGGCAAGCGCATCATGGAGCGC
GCCGGCCTGAAGAAATTCTCGATGGAGCTAGGCGGCAAGTCGCCGGTGCTGGTCTTCGACGATGCGGACCTGGATCGCGC
GCTCGATGCGTCACTGTTCACCATTTTCTCCATCAACGGCGAACGCTGCACGGCGGGCTCGCGCATCTTCGTGCAAGAAA
GTGTCTATGACGATTTCGTACGCAAGTTTGCCGAACGTGCCAAGCGGCTTGTGGTGGGCGACCCGGCAGATGAGACAACC
CATGTCGGCTCGATGATCACGCGCGCGCATTGGGAGAAGGTCACGGGCTACATCCGTCTCGGCGAACAGGAGGGCGCGAA
GATTCTGGCTGGCGGCGCGGAGAAGCCCGCTGGCCTGCCCGGCCACCTGCAGAACGGCAACTTCGTGGCGCCCACGGTGC
TGGCCAATGTCGACAACCGCATGCGGGTGGCGCAGGAAGAAATCTTTGGCCCCGTGGCTTGCCTCATCCCGTTCAAGGAT
GAGGCCGATGGCCTGAAACTGGCCAATGACGTGGAATACGGTCTGGCCTCGTACATCTGGACGCAGGATGTGGGCAAGGT
GCACCGTGTGGCGCGTGGGATCGAAGCCGGCATGGTCTTCGTCAATAGCCAGAACGTGCGCGACCTGCGGCAGCCTTTCG
GCGGTGTCAAAGCGTCCGGTACCGGGCGTGAGGGTGGCGAGTACAGTCTCGAGGTGTTTGCCGAAATCAAAAATGTCTGT
ATCTCGATGGGCAGCCACCATATCCCGCGCTGGGGCGTTTGA

Protein sequence :
MSRVNMDPVKHWIDGRQVDSAERFVTTNPATGEAITEVASGGEAEINAAVAAAKAAFPAWANTPAKQRAKLMRRLGELIE
QNVPHLAALETMDTGLPIAQTSKQLIPRASENFHFFAAVCTQVNGRTYPVDDQMLNYTLYQPVGVCALISPWNVPFMTAT
WKVAPCLALGNTAVLKMSELSPLTADQLGRLALEAGIPPGVLNVVQGYGATAGDALVRHPDVRVVSFTGGTTTGKRIMER
AGLKKFSMELGGKSPVLVFDDADLDRALDASLFTIFSINGERCTAGSRIFVQESVYDDFVRKFAERAKRLVVGDPADETT
HVGSMITRAHWEKVTGYIRLGEQEGAKILAGGAEKPAGLPGHLQNGNFVAPTVLANVDNRMRVAQEEIFGPVACLIPFKD
EADGLKLANDVEYGLASYIWTQDVGKVHRVARGIEAGMVFVNSQNVRDLRQPFGGVKASGTGREGGEYSLEVFAEIKNVC
ISMGSHHIPRWGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpaE AAO17179.1 HpaE Not tested tcd island Protein 1e-180 78
orf17 AAO17183.1 Orf17 Not tested tcd island Protein 5e-63 42