Gene Information

Name : Rpic12D_1609 (Rpic12D_1609)
Accession : YP_002981565.1
Strain :
Genome accession: NC_012856
Putative virulence/resistance : Unknown
Product : peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1686
EC number : -
Position : 1707954 - 1709093 bp
Length : 1140 bp
Strand : -
Note : PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: rso:RSc1609 D-alanyl-D-alanine-endopeptidase (penicillin-binding protein)

DNA sequence : 
ATGACCGTCGCGCTCGCTGCCGTCTCTGTCACTACCGTGGCCAACGCTGCCACGACCGACAAAAAACCCGCCGCTAGCAA
GAAAGCCAAATCCAAAGGCAAGACCGTCGCCAATCGCAAGGCCAGCGCCAAAGTCGCGGCTGCGAGCAGCGATGAAGTCG
CCTCCAGCAAAGTCCGCAAGGTCGTCACCGTCAAGGGCAAGCGCCGCGTGATCATGGTTGAGCGTGGTGCTCGTCCGGTG
CGCGCCGCGTTTGTGCCGGCATCGCCGACGCTGGGTGAAGCGATGGGCCTGCGTGCGACGCCCGATGCGTTGGCGCTGCG
CTCCTCCGTCGCGCTGGTGATGGACCAGAACAACGGCGAAGTGCTGTTCCAGAAGAATTCGTCGGCCGTGCTGCCGATCG
CCTCGATCACCAAGCTGATGACCGCACTGGTCGTGACCGATGCACATCAGCCGATGGACGAGCTGCTGGAAATTACCGAT
GAAGATCGCGACTACGAGCGCAACACGGGCTCACGCCTGCGCTTCGGCACGATGCTCACGCGCGAAGACTTGCTGCTGCT
GGCGCTGATGTCGTCGGAAAACCGTGCGGCCTCTGCACTTGGCCGCAACTATCCGGGCGGTCGTCCGGCATTCGTTGCCG
CCATGAACCGCAAGGCACGCGAGCTGGGCATGAACGACACGCACTATGTCGATTCGAACGGCCTGTCGAGCAGCAATGTA
TCGAGCGCGCAGGATCTTGCCAAGATCGTGATGGCGGCCTATAAGGTACCGCTCATTCGGCAGTTCACGACCACGCCTGA
ACATACGGTCAGCGCCAACGGGCGCACGCTCCACTACGTCAACACCAACCGTCTGGTGCGCGGCGGAGAGTGGGATATCG
GTCTTCAGAAGACCGGCTTCATCAACGAGGCAGGCCGCTGCCTGGTGATGCAGGCCAACGTGCATGGCCGCAACGTCGTG
ATGGTGTTCCTGGATTCGGCCGGCAACCTCACGCGTTTTGCAGACGCCACGCGCGTGCGCAATTGGCTGGAGCGCAATCC
GCACATCGAGCCGGCCACGCAGGCGGCAGCGCCGTTGCGGAATGTGCCGGTGTCCACGCAGCCGGCAACCGTGCTGGCTT
CGGACCAGCACGGCGCTTGA

Protein sequence : 
MTVALAAVSVTTVANAATTDKKPAASKKAKSKGKTVANRKASAKVAAASSDEVASSKVRKVVTVKGKRRVIMVERGARPV
RAAFVPASPTLGEAMGLRATPDALALRSSVALVMDQNNGEVLFQKNSSAVLPIASITKLMTALVVTDAHQPMDELLEITD
EDRDYERNTGSRLRFGTMLTREDLLLLALMSSENRAASALGRNYPGGRPAFVAAMNRKARELGMNDTHYVDSNGLSSSNV
SSAQDLAKIVMAAYKVPLIRQFTTTPEHTVSANGRTLHYVNTNRLVRGGEWDIGLQKTGFINEAGRCLVMQANVHGRNVV
MVFLDSAGNLTRFADATRVRNWLERNPHIEPATQAAAPLRNVPVSTQPATVLASDQHGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00303 YP_008207768.1 D-alanyl-D-alanine carboxypeptidase Not tested AbaR25 Protein 3e-51 49
BJAB0868_00307 YP_008211633.1 D-alanyl-D-alanine carboxypeptidase Not tested AbaR26 Protein 3e-51 49