Gene Information

Name : Rpic12D_0015 (Rpic12D_0015)
Accession : YP_002979999.1
Strain :
Genome accession: NC_012856
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1126
EC number : -
Position : 17872 - 18609 bp
Length : 738 bp
Strand : +
Note : PFAM: ABC transporter; SMART: AAA ATPase; KEGG: rso:RSc2106 amino-acid ATP-binding ABC transporter protein

DNA sequence :
ATGCCGCTCGTTGATCTCTGCGCCGTACACAAGCATTACGGCAACAACCACGTTCTCAAGGGCGTCGACCTGCGCGTGGA
GGCCGGCCAGGTGGTCGCCATCATTGGGCGCAGCGGCTCGGGCAAGAGCACGCTGCTGCGGTCCATCAACGGGCTGGAAG
CGATTGACGACGGGCAGATCGTCGTGGACAACGCGGTGCTCCAGGGCTCGCAGGCCACGCCCGCGCGGTTGCGCGCGCTG
CGCCTGAACGTGGGCATGGTGTTCCAGCAGTTCAACCTGTTTCCGCACCTCACAGCCGGCCAGAACGTGGCGCTGTCGCC
CGTGGTGGTCAAGGGCATGAAGAAGGCCGACGCCAACGACCTCGCCCGTCAGATGCTCGTCAAGGTGGGCCTGGCCGATA
AGTTCGATGCGTACCCCGACCAGCTCAGCGGCGGCCAGCAGCAGCGCGTGGCGATTGCCCGCGCGCTGGCCATGCAGCCG
AAGGTGCTGCTGTGCGACGAGATCACCTCCGCGCTCGATCCGGAACTGGTGAACGAAGTGCTGGCCGTGGTGAAGCAGCT
CGCCGCCGAAGGCATGACGCTGATCATGGTCACGCACGAGATGCGCTTCGCGCGTGACGTGGGCGATCAGCTCGTCTTCA
TGCACCAGGGGTTGATCCATGAAAGCGGGCCGGCCAAGGAGGTGTTTGCCAGCCCCAAGACGGCGGAACTGGCGGCGTTC
ATTGGCGCGGTGCAGTGA

Protein sequence :
MPLVDLCAVHKHYGNNHVLKGVDLRVEAGQVVAIIGRSGSGKSTLLRSINGLEAIDDGQIVVDNAVLQGSQATPARLRAL
RLNVGMVFQQFNLFPHLTAGQNVALSPVVVKGMKKADANDLARQMLVKVGLADKFDAYPDQLSGGQQQRVAIARALAMQP
KVLLCDEITSALDPELVNEVLAVVKQLAAEGMTLIMVTHEMRFARDVGDQLVFMHQGLIHESGPAKEVFASPKTAELAAF
IGAVQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0461 YP_039910.1 ABC transporter ATP-binding protein Not tested vSa¥á Protein 5e-42 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rpic12D_0015 YP_002979999.1 ABC transporter NC_012469.1.7686878. Protein 1e-28 41