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Name : Rpic12D_1089 (Rpic12D_1089) Accession : YP_002981053.1 Strain : Genome accession: NC_012856 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein MutS Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0249 EC number : - Position : 1142412 - 1145060 bp Length : 2649 bp Strand : - Note : This protein performs the mismatch recognition step during the DNA repair process DNA sequence : ATGGCTGAACACTCCGCTCCGGTTCTGGAGATCGACCCGAAATACGGCCCGTTCGACAAGCACACGCCGATGATGCAACA GTACCTTCGCTTGAAGGCTGGGCATCCGGACACGCTTGTCTTCTACCGCATGGGCGACTTTTACGAGCTCTTCTTTGAAG ACGCCGAAAAAGCCTCGCGGCTGCTCGATATCACGCTCACCGCACGCGGCAGTTCCAACGGGCATCCGATCCGCATGGCG GGTATCCCGTTCCACGCTGCCGAGCAATACCTTGCCAAGCTGGTCAAGCTGGGCGAATCCGTTGCCATCTGCGAGCAAAT CGGGGACCCTGCGACGACCAAGGGGCCGGTCGAACGCAAGGTCGTGCGCGTCGTCACGCCCGGCACCTTGACGGACGCCG CGCTGCTTTCCGACAAGATCAACAACCATCTGCTGGCCATCGCGCAAGTGCCTGGCAAACGCGGCGCGGCGCCGCTGATG GGCCTGGCGTGGCTCAACCTCGTCGGCGGCGAATTGCGCGTGATGGAATGCAGCCCCGACCAGCTCGACCGCGAACTCGA ACGCATCCGCCCCGCCGAAGTGCTGGCCAACGATGCGACGCTCAACACCCTCCAGGTGGATGTTGCCCGCACGCGCCTGC CGGATTGGCACTTCGACGTGGAAGCCGGCACCCGCCGCCTGCGCGAACAACTCGGCGTGGCGAGCCTCGTCGCCTTTGGC GCGGAAACGCTGACGGCCGCATTGGCCGCTGCCGGTGCGCTGCTGAATTACGCAGCGGCCACGCAAGGCCAATCCCTGCG CCACGTGATCGGCCTCACCGTCGAGCATGAAAGCGAATTCATCGGTCTGGACACCGCCACGCGCCGCAACCTGGAGCTGA CCGAAACGCTTCGTGGGCAGGAATCGCCGACGCTGTTTTCGCTGCTCGACACCTGCGCGACCAGCATGGGCAGCCGCCTG CTGCGCCACTGGCTGCATCATCCGCTGCGGGATCGCGCTGTGCCGCAAGCACGGCAGCAAGCGATTGAAGTGCTGCTCGG CAGCGATTGGCAAACGTTGCGTGCGACGCTGCGCACACTGTCGGACGTGGAGCGCATTACGGGGCGACTGGCGCTGCTGT CGGCGCGCCCGCGGGATCTGTCGTCGTTGCGCGACACGCTCGCGCGCCTGCCGGAGATTCGCGAAGAACTGCCGCAGAGT GACGCGGCTCCGCTGCTGACAGAGCTGTACGCCGCACTGAGCTTGCCTGAAGACGCCCACGCCCTGCTGCAGCGCGCCGT GATGGCCGAGCCGGCAGCCATGGTGCGCGACGGCGGCGTCATTGCCCGCGGCTACGATGCCGACCTCGACGAGCTGCGCG ACATCTCGGAAAACTGTGGCCAGTTCCTCGTCGATCTGGAAGCCCGAGAGCGCGAGCGCACCGGCATTGCCAATCTGCGC GTGGAATACAACCGCGTGCACGGTTTCTACATCGAAGTCACCAACGGCCAGGCCGCCAAGGTGCCCGACGATTACCGCCG CCGCCAGACGCTGAAGAACGCCGAGCGTTACATCACGCCCGAGTTGAAAGCGTTCGAAGACAAGGCGTTGTCGGCGCAGG ACCGTGCCCTGTCGCGCGAAAAGCTCCTCTACGAAGAGCTGCTCCAGAAACTGTTGCCGCACCTGGCCGAATTCAAACGT ATCGCCGCCGCGCTGGCACAGGCCGATGTGCTCGCGACGCTGGCCGAGCGTGCGCATGCGCTGTCGTGGTCGCGCCCCAC GCTGACGGACGCACCCGGTATTGAGCTGACGCGCGCACGCCATCCGGTGGTCGAACAACAAGTCGAACAGTTCGTCGCCA ACGACTGCATGCTGCAGGAGGCGCGCAAGCTGCTGCTGATCACGGGCCCAAACATGGGCGGTAAATCGACCTTCATGCGG CAAACCGCGCTCGTCGTGCTGCTCGCTTACGTGGGCGCATTTGTGCCGGCGGAGGTCGCAGTCATCGGACCGATCGACCG CATCTTCACGCGCATCGGCGCGGCGGACGATCTGGCGGGCGGGCGTTCGACCTTCATGGTCGAAATGACCGAAGCCGCTG CCATCCTGCACCGCGCGACGCCCAACAGCCTCGTGCTGATGGACGAAATCGGGCGAGGCACGAGCACGTTCGACGGCCTG GCGCTCGCCTGGGCAATTGCGCGTCACTTGCTGTCGCACAACCGCAGCCACACGCTGTTCGCAACGCACTATTTCGAACT GACGCAACTGCCGCAGGAGTTCGCTCAGGCAGCGAACGTGCACCTCTCCGCCGTCGAGCATGGTGATGGCATTGTTTTCC TGCATGCCGTGCAGGAGGGTCCGGCCAGCCAGAGTTACGGCCTGCAGGTCGCGCAGCTGGCGGGCGTGCCGCAGCCGGTC ATTCGCGCCGCGCGCAAGCGGCTCGCGTGGCTGGAGCAGCATTCCGCCGACACCGGCGCCACGCCTCAGTTGGACCTCTT CGCCCTCGCCACCGATACGCCCATCGACGACGAAGGCGACGCCGACGCCGAAACACCCGACAGCGCGCTTGCGGATGCGC TTGCCGGGATCGATCCCGACGATATGACGCCGCGGGAAGCGCTTGATGCGTTGTACCGCCTCAAGGCATTGGCGAGCCCG GCCGCCTGA Protein sequence : MAEHSAPVLEIDPKYGPFDKHTPMMQQYLRLKAGHPDTLVFYRMGDFYELFFEDAEKASRLLDITLTARGSSNGHPIRMA GIPFHAAEQYLAKLVKLGESVAICEQIGDPATTKGPVERKVVRVVTPGTLTDAALLSDKINNHLLAIAQVPGKRGAAPLM GLAWLNLVGGELRVMECSPDQLDRELERIRPAEVLANDATLNTLQVDVARTRLPDWHFDVEAGTRRLREQLGVASLVAFG AETLTAALAAAGALLNYAAATQGQSLRHVIGLTVEHESEFIGLDTATRRNLELTETLRGQESPTLFSLLDTCATSMGSRL LRHWLHHPLRDRAVPQARQQAIEVLLGSDWQTLRATLRTLSDVERITGRLALLSARPRDLSSLRDTLARLPEIREELPQS DAAPLLTELYAALSLPEDAHALLQRAVMAEPAAMVRDGGVIARGYDADLDELRDISENCGQFLVDLEARERERTGIANLR VEYNRVHGFYIEVTNGQAAKVPDDYRRRQTLKNAERYITPELKAFEDKALSAQDRALSREKLLYEELLQKLLPHLAEFKR IAAALAQADVLATLAERAHALSWSRPTLTDAPGIELTRARHPVVEQQVEQFVANDCMLQEARKLLLITGPNMGGKSTFMR QTALVVLLAYVGAFVPAEVAVIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLMDEIGRGTSTFDGL ALAWAIARHLLSHNRSHTLFATHYFELTQLPQEFAQAANVHLSAVEHGDGIVFLHAVQEGPASQSYGLQVAQLAGVPQPV IRAARKRLAWLEQHSADTGATPQLDLFALATDTPIDDEGDADAETPDSALADALAGIDPDDMTPREALDALYRLKALASP AA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 3e-165 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Rpic12D_1089 | YP_002981053.1 | DNA mismatch repair protein MutS | VFG0562 | Protein | 0.0 | 53 |
