Gene Information

Name : Rleg_6006 (Rleg_6006)
Accession : YP_002978518.1
Strain :
Genome accession: NC_012852
Putative virulence/resistance : Virulence
Product : sugar transferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG2148
EC number : -
Position : 34483 - 35142 bp
Length : 660 bp
Strand : -
Note : PFAM: sugar transferase; KEGG: rec:RHECIAT_PC0000350 galactosyltransferase protein

DNA sequence : 
ATGGCAGTTGACGCGAAACGGTCTTTGACGATACGGCAACACGACAGGGCGGATGGCGGAAAGACCGCCGGTAAGGCGGA
AGAACTGCGGAGCATGGGTCTGAAACGGGCGGTGGATTTTTTCTTGGCTTTGATTGCGGCGGCGATCCTGCTCGTTCCAA
TCCTTGTCGTCGCTCTTTGTGTGCGACTGACCTCGCCGGGACCGATCCTCTATTGGTCCAAACGTGTCGGACGTTTCAAT
CAGATCTTCCTGATGCCGAAATTTCGCAGCATGCGTGTCGACACACCGACGGTTGCCACGCATCTGCTCGAAAATCCGGA
TCGGTTTCTGACACCCATAGGCTCGTTTCTGCGCAAATCCAGCCTCGACGAACTGCCACAACTCTGGTGCATTCTCGAGG
GGAAGATGAGTTTCGTCGGCCCGCGACCGGCACTCTACAATCAATATGACCTGATAGAGTTGCGCACCGCCCATGGTGTC
GACAAGCTCCTGCCCGGATTGACCGGATGGGCGCAGATCAATGGCCGGGACGAATTGCCGATTCCGGAGAAGGTGAAATT
CGATGTCGAATATCTCCAACGTCGCTCGTTCGGCTTCGACATACGCATTCTGTTTATGACTGCCGGGAAGGTCATCCGCC
GTAAGGGCATACGACATTAA

Protein sequence : 
MAVDAKRSLTIRQHDRADGGKTAGKAEELRSMGLKRAVDFFLALIAAAILLVPILVVALCVRLTSPGPILYWSKRVGRFN
QIFLMPKFRSMRVDTPTVATHLLENPDRFLTPIGSFLRKSSLDELPQLWCILEGKMSFVGPRPALYNQYDLIELRTAHGV
DKLLPGLTGWAQINGRDELPIPEKVKFDVEYLQRRSFGFDIRILFMTAGKVIRRKGIRH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 7e-31 49
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 1e-32 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rleg_6006 YP_002978518.1 sugar transferase VFG1369 Protein 3e-29 50
Rleg_6006 YP_002978518.1 sugar transferase VFG1309 Protein 2e-32 46