Gene Information

Name : Rleg_4449 (Rleg_4449)
Accession : YP_002978226.1
Strain : Rhizobium leguminosarum WSM1325
Genome accession: NC_012850
Putative virulence/resistance : Unknown
Product : ABC transporter
Function : -
COG functional category : R : General function prediction only
COG ID : COG4172
EC number : -
Position : 4583314 - 4584951 bp
Length : 1638 bp
Strand : +
Note : PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter; SMART: AAA ATPase; KEGG: ret:RHE_CH00178 peptide ABC transporter, ATP binding protein

DNA sequence :
ATGAGTGACATGACAGAACCGCTGCTTTCCGTCCGCGATCTCTCGGTTGCCTTTCATCAGGGCGGCGAGACCTCGCTCGC
CGTCGATCACATCTCCTTCGATATCGCCAAAGGCGAGGTCGTGGCGCTCGTCGGCGAATCCGGCTCCGGCAAGTCGGTCT
CGGCCAACTCGATCCTGCGACTTTTGCCTTATCCCTCGGCAAGCCATCCCTCCGGCGAAATCCTCTTCAAGGGTAAGGAC
CTCTTGAAGGCGTCGGAGCGGGAACTGCGTGAAGTGCGCGGCAACGACATCACCATGATCTTCCAGGAGCCGATGACCTC
GCTCAATCCGCTTCATACGATCGAGAAGCAGATCGCCGAGATCCTCGCCCTGCATCAGGGCCTTACCGGCCAGCCGGCGC
GTGAGCGCGTGCTGGAATTGCTGAACCAGGTCGGCATCCGCGAGCCGGAGAGGCGGTTGAAGGCCTATCCGCATGAACTG
TCAGGCGGCCAGCGCCAGCGCGTCATGATCGCCATGGCGCTCGCCAACCGGCCGGAATTGCTGATCGCCGACGAGCCGAC
CACCGCCCTCGACGTCACCGTGCAGGCGCAGATCCTCGAATTGCTCCGGCAGTTAAAAGCCGTCCACGGCATGTCGATGC
TGTTCATCACTCATGATCTCGGCATCGTCCGCAAATTCGCTGATCGCGTCTGCGTCATGACCAAGGGCAGGATCGTCGAA
ACCGGCACCGTCGAGGACGTCTTCGCCAATCCGAAGCATGAATATACCCGGCATCTCCTTGCCTCCGAACCGCGCGGCGA
GCCGCCGCTCGCCGATCCGTCGAAACCGATGGTGATGGAAGGTTCGGATATCCGTGTCTGGTTCCCGATCAAGGCTGGGC
TGATGCGCCGTGTCGTCGATCACGTCAAGGCGGTCGACGGCATCGATCTTTCGCTGCGCGCCGGCCAGACGCTCGGCGTC
GTCGGCGAATCCGGCTCGGGCAAGACCACGCTCGGCCTGGCGCTCACCCGGCTGATTTCCTCGCAAGGGCGGATCGCCTT
CGTCGGCAAGGACATAGCTGGCTATTCATTCAATGAGATGCGGCCGTTGCGCAACCAGCTGCAGGTCGTCTTCCAGGATC
CCTACGGATCGCTGAGCCCGCGCATGTCCGTCGGCGATATCGTCGCCGAAGGGCTGAAGGTGCATGAGCGGTCGCTGACC
GCAGAAGAACGCGACCAGCGCGTCTGCTGGGCGCTGGAGGAGGTGGGTCTCGATCCGCTGACCCGCTGGCGTTATCCGCA
CGAATTCTCGGGCGGCCAGCGCCAGCGCATCGCCATCGCCCGGGCCATGGTGCTGAAGCCGCGCTTCGTCATGCTCGACG
AGCCGACCTCTGCGCTCGACATGAGCGTGCAGGCGCAGGTGGTCGATTTGCTGCGCGATCTGCAGAAGAAGCACGATCTC
GCCTATCTCTTCATCAGCCACGACCTGAAAGTGGTGAAGGCGCTCGCCAACGACGTCATCGTCATGCGTTTCGGCAAGGT
GGTGGAGCAGGGACCGTCCTCGGAAATCTTCCGCGCGCCGAAGGATGATTACACCAGGGCGCTGATGGCCGCCGCTTTCA
ACATCGAGGCGGTGCCGACGCCCGCCGTGCAGCAGTAA

Protein sequence :
MSDMTEPLLSVRDLSVAFHQGGETSLAVDHISFDIAKGEVVALVGESGSGKSVSANSILRLLPYPSASHPSGEILFKGKD
LLKASERELREVRGNDITMIFQEPMTSLNPLHTIEKQIAEILALHQGLTGQPARERVLELLNQVGIREPERRLKAYPHEL
SGGQRQRVMIAMALANRPELLIADEPTTALDVTVQAQILELLRQLKAVHGMSMLFITHDLGIVRKFADRVCVMTKGRIVE
TGTVEDVFANPKHEYTRHLLASEPRGEPPLADPSKPMVMEGSDIRVWFPIKAGLMRRVVDHVKAVDGIDLSLRAGQTLGV
VGESGSGKTTLGLALTRLISSQGRIAFVGKDIAGYSFNEMRPLRNQLQVVFQDPYGSLSPRMSVGDIVAEGLKVHERSLT
AEERDQRVCWALEEVGLDPLTRWRYPHEFSGGQRQRIAIARAMVLKPRFVMLDEPTSALDMSVQAQVVDLLRDLQKKHDL
AYLFISHDLKVVKALANDVIVMRFGKVVEQGPSSEIFRAPKDDYTRALMAAAFNIEAVPTPAVQQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 4e-101 44
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-85 43
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-85 43
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 3e-85 43
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-85 43