Gene Information

Name : Rleg_3965 (Rleg_3965)
Accession : YP_002977745.1
Strain : Rhizobium leguminosarum WSM1325
Genome accession: NC_012850
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 4041449 - 4042201 bp
Length : 753 bp
Strand : -
Note : PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: ret:RHE_CH03884 oxidoreductase protein

DNA sequence :
ATGAGCGATACACCTGTTGTTCTCATTACCGGCGGAAGCCGGGGTATCGGCGCCGCGGCTGCACGGCTCGCGGCACGCCA
GGGCTGGCGTGTCGCGGTGAACTACGCCGCCAACCGTCAAGCCGCGGATGCCGTCGTGGCTGCGATTGTCGAGGATGGCG
GCGAGGCCGTGGCGATCCAGGGGGATGTCGGCAAGGCTGCGGATATCGTCTCGATGTTTACGACGGTCGACCGGCATTTC
GGCCGGCTCGACGGGCTCGTCAACAATGCCGGCATCGTCGATTATCCCCAGCGCGTCGACGAGATGTCGGCGGAGCGGAT
CGAGCGCATGCTGCGCGTCAATGTGACAGGCTCGATACTCTGCGCCGCAGAGGCCATACGTCGCATGTCGAGCCGGCATG
GCGGGCAGGGCGGGGCGATCGTCAACATCTCGTCGATGGCGGCGATCCTCGGTTCGGCGACGCAGTATGTCGATTATGCC
GCCTCGAAGGCGGCGATCGACACGTTCACCGTCGGGCTGGCGCGCGAGGTCGCAGCCGAGGGTATCCGTGTGAATGCGAT
AAGGCCCGGCGTCATCGAAACCGACCTTCATGCCTCCGGCGGCCTGCCGGATCGGCCGCGGGAACTGGCGCCGTCGATCC
CGATGCAGCGCGCGGGCACGCCCGCGGAGGTGGCGGATGCGATCCTCTATCTTCTGTCACCTTCGGCTTCCTATATCACC
GGCGCGATCCTCAATGTGAGCGGCGGCCGCTAG

Protein sequence :
MSDTPVVLITGGSRGIGAAAARLAARQGWRVAVNYAANRQAADAVVAAIVEDGGEAVAIQGDVGKAADIVSMFTTVDRHF
GRLDGLVNNAGIVDYPQRVDEMSAERIERMLRVNVTGSILCAAEAIRRMSSRHGGQGGAIVNISSMAAILGSATQYVDYA
ASKAAIDTFTVGLAREVAAEGIRVNAIRPGVIETDLHASGGLPDRPRELAPSIPMQRAGTPAEVADAILYLLSPSASYIT
GAILNVSGGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VSAL_I1482 YP_002262921.1 glucose 1-dehydrogenase Not tested Not named Protein 2e-44 54
orf29 AAO17195.1 Orf29 Not tested tcd island Protein 1e-43 52