Gene Information

Name : Rleg_3813 (Rleg_3813)
Accession : YP_002977595.1
Strain : Rhizobium leguminosarum WSM1325
Genome accession: NC_012850
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 3884060 - 3886660 bp
Length : 2601 bp
Strand : -
Note : KEGG: rec:RHECIAT_CH0004021 chaperone heat-shock protein; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA-2 domain protein; AAA ATPase; ATPase associated with various cellular activities AAA_5; Clp domain protein; SMART: AAA ATPase

DNA sequence :
ATGAATATCGAGAAATATTCGGAGCGGGTGCGCGGTTTCATCCAGTCCGCCCAGACCTATGCGCTGGCGCAGGGTCACCA
GCAATTCACGCCCGAACATGTGCTGAAAGTCCTGCTCGACGACGATCAGGGCATGGCGGCGTCGCTGATCGAGCGCGCCG
GCGGCGATGCCAAGGCCGCCCGCCTGGCCAATGACGCGGCTCTCGCCAAGTTGCCGAAGATCTCCGGCGGCAACGGCAAC
ATCTATCTGGCACAACCGCTCGCTAAGGTCCTTTCGACCGCCGAAGAAGCGGCGAAGAAGGCCGGCGACAGCTTCGTAAC
CGTCGAGCGCCTGCTGCAGGCGCTGGCGATCGAATCCTCGGCCTCGACCTTTTCGACGCTGAAGAACGCAGGCGTGACGG
CCCAGGGCCTCAACCAGGTCATCAACGACATCCGCAAGGGCCGGACGGCGGATTCCTCCAATGCCGAGCAGGGTTTTGAC
TCGCTGAAGAAGTTCGCACGCGATCTCACCGCCGAAGCCCGCGAGGGCAAGCTCGACCCGGTGATCGGCCGCGACGACGA
AATCCGCCGCACCATCCAGGTGCTTTCGCGCCGTACCAAGAACAATCCAGTGCTGATCGGCGAACCCGGCGTCGGCAAGA
CGGCGATCGTCGAGGGCCTGGCGCTGCGCATCGTCAACGGTGACGTGCCGGAATCGCTCAAGGACAAGAAGCTGATGGCG
CTCGACATGGGCGCGCTGATTGCCGGTGCGAAATACCGCGGCGAATTCGAGGAGCGGCTGAAGGCCGTGCTCAATGAAGT
CCAGGCGGAAAACGGCGAGATCATCCTGTTCATCGACGAGATGCACACGCTGGTCGGCGCCGGCAAGGCGGATGGGGCGA
TGGATGCCTCCAACCTCCTGAAGCCGGCTCTTGCCCGCGGTGAGCTGCATTGCGTCGGCGCGACCACGCTCGACGAATAC
CGCAAACATGTCGAGAAGGATCCGGCCCTTGCCCGCCGCTTCCAGCCCGTCGTCGTCGATGAACCGACGGTCGAAGACAC
GATCTCGATCCTGCGCGGCTTGAAGGAAAAATACGAGCAGCATCACAAGGTGCGCATCGCCGATGCGGCGCTGGTGGCTG
CGGCGACGCTTTCCAACCGCTATATCACCGATCGTTTCCTGCCGGACAAGGCGATCGACCTGATGGACGAGGCGGCAGCG
CGGTTGCGCATGCAGGTGGATTCCAAGCCGGAAGAGCTCGACGAACTCGACCGCCGTATCATGCAGCTGAAGATCGAGCG
CGAAGCGCTGAAAAAGGAAACGGACGTCGCGTCTGCCGACCGTCTGAAGCGGCTTGAAACCGAAGTGACCGATCTCGAGG
AACAGGCCGATGCGCTGACGGCCCGCTGGCAGGCGGAAAAGCAGAAACTCGGCCTTGCCGCCGATCTCAAGAAGCAGCTC
GATGATGCCCGCAACGAACTGGCGATCGCCCAGCGCAAAGGCGAATTCCAGCGTGCCGGCGAGCTGACCTACGGCGTCAT
TCCCGATCTTGAAAAGCAGCTCGTCGATGCCGAGAAGCAGGATGGCGACCGCGGCGCGATGGTGCAGGAGGTGGTCACCC
CCGACAATATCGCCCATATCGTTTCCCGCTGGACCGGCATTCCGGTCGACAGGATGCTGGAGGGCGAACGTGACAAGCTG
CTTCGGATGGAAGACGAACTGGCGAAATCGGTGATCGGCCAAGGCGATGCGGTTCAGGCCGTGTCGCGCGCCGTCCGCCG
CGCGCGCGCCGGCCTGCAGGATCCGAACCGGCCGATCGGCTCGTTCATCTTCCTCGGCCCGACCGGCGTCGGCAAGACGG
AGCTCACCAAGGCGCTCGCCCGCTTCCTCTTCGACGACGAAACGGCGATGGTGCGCATGGACATGTCGGAATATATGGAG
AAGCACTCCGTTGCCCGGCTGATCGGTGCACCTCCCGGCTATGTCGGTTATGACGAAGGCGGAGCGCTGACGGAAGCCGT
GCGTCGCAGACCCTATCAGGTCGTGCTGTTCGACGAGATCGAAAAGGCGCATCCCGACGTCTTCAACATCCTGCTGCAGG
TGCTGGACGATGGACGCCTGACCGACGGTCAGGGCCGGACGGTCGATTTCCGCAACACGATGATCATCATGACCTCGAAC
CTCGGCGCCGAATATCTGACGCAACTGAGGGATGGCGACGACAGCGACACGGTTCGCGAGCAGGTGATGGAGGTCGTGCG
CGGGCATTTCCGGCCGGAATTCCTGAACCGCATCGACGAGATCATTCTGTTCCATCGCTTGAAGCGCGAGGAGATGGGCG
CGATCGTCGATATCCAGCTGAAGCGGCTGGTGGCTTTGCTGTCCGAGCGCAAGATCATCATCGATCTCGACGAGGAAGCC
CGGCACTGGCTGGCGAACAAGGGTTACGATCCGGTCTACGGTGCAAGGCCGCTGAAGCGGGTGATCCAGAAGTTCGTGCA
GGATCCGCTGGCCGAGCAGATCCTGTCCGGCCAGGTGCCGGATGGATCGACGGTGACGGTGACGAGCGGTTCGGACCGGC
TGCAGTTCAGGACGAGGCAGACGGTGAGCGAAGCAGCGTAA

Protein sequence :
MNIEKYSERVRGFIQSAQTYALAQGHQQFTPEHVLKVLLDDDQGMAASLIERAGGDAKAARLANDAALAKLPKISGGNGN
IYLAQPLAKVLSTAEEAAKKAGDSFVTVERLLQALAIESSASTFSTLKNAGVTAQGLNQVINDIRKGRTADSSNAEQGFD
SLKKFARDLTAEAREGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPESLKDKKLMA
LDMGALIAGAKYRGEFEERLKAVLNEVQAENGEIILFIDEMHTLVGAGKADGAMDASNLLKPALARGELHCVGATTLDEY
RKHVEKDPALARRFQPVVVDEPTVEDTISILRGLKEKYEQHHKVRIADAALVAAATLSNRYITDRFLPDKAIDLMDEAAA
RLRMQVDSKPEELDELDRRIMQLKIEREALKKETDVASADRLKRLETEVTDLEEQADALTARWQAEKQKLGLAADLKKQL
DDARNELAIAQRKGEFQRAGELTYGVIPDLEKQLVDAEKQDGDRGAMVQEVVTPDNIAHIVSRWTGIPVDRMLEGERDKL
LRMEDELAKSVIGQGDAVQAVSRAVRRARAGLQDPNRPIGSFIFLGPTGVGKTELTKALARFLFDDETAMVRMDMSEYME
KHSVARLIGAPPGYVGYDEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTMIIMTSN
LGAEYLTQLRDGDDSDTVREQVMEVVRGHFRPEFLNRIDEIILFHRLKREEMGAIVDIQLKRLVALLSERKIIIDLDEEA
RHWLANKGYDPVYGARPLKRVIQKFVQDPLAEQILSGQVPDGSTVTVTSGSDRLQFRTRQTVSEAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 6e-110 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rleg_3813 YP_002977595.1 ATP-dependent chaperone ClpB VFG2076 Protein 1e-119 45
Rleg_3813 YP_002977595.1 ATP-dependent chaperone ClpB VFG2084 Protein 7e-109 43