Gene Information

Name : Rleg_3724 (Rleg_3724)
Accession : YP_002977506.1
Strain : Rhizobium leguminosarum WSM1325
Genome accession: NC_012850
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG3842
EC number : -
Position : 3778174 - 3779160 bp
Length : 987 bp
Strand : +
Note : PFAM: ABC transporter; transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rec:RHECIAT_CH0003932 probable spermidine/putrescine ABC transporter, ATP-binding protein

DNA sequence : 
ATGACACCCGCCGTCCGTTTCCAGCAGGTATCACGCCATTTCGGCCAGGTTCGCGCCGTCGACGGCGTCGATCTCGAGAT
CGCGCCCGGCGAATTCTTTGCCATGCTCGGGCCGTCCGGCTCCGGCAAGACGACGTGCCTGCGATTGATCGCCGGCTTCG
AGCAGCCGACCGCGGGCCATATCCAGATCTTCGGCGAGACGGCCGACGGCGTTCCGCCCTATCGCCGCAACGTCAACACC
GTATTCCAGGACTACGCGCTCTTCCCGCATCTCAACATCCTCGACAATGTCGCCTACGGGCTGATGGTCAAAGGCGTCGG
CAAGGCGGAGCGGATGAAAGCGGCAGGCGATGCCCTCGAGCTCGTCAAGCTGCCGGGTTACGGCGCCCGCCGCCCCGGCC
AGCTGTCCGGTGGTCAGCGCCAGCGCGTGGCGCTCGCCCGCGCACTGGTCAACAAGCCGAAGGTGCTGCTGCTCGACGAG
CCGCTCGGCGCGCTCGACCTGAAGCTCCGCGAACAGATGCAGGAGGAGCTGAAGAGCCTGCAGCGCGCACTCGGCATCAC
CTTCGTCTTCGTCACCCACGATCAGGGTGAGGCGCTGTCCATGGCCGATCGCGTCGCCGTCTTCAACGACGGCAATATCG
TCCAGGAGGGCACGCCGCAGGATATCTACCGCCGCCCGAAGAACCGCTTCGTCGCCGATTTCGTCGGCTCGTCGAACGTC
ATCGCACCTGATCTGATGGCCTCACTCGGCGGCGAAAGACGCTGGGCAAGCCTCCGTCCCGAAGCAATCCGGCTGGCAGG
CGACGGTGTCGCGGCGCAGGTCGACAATGCGAGCTTCCTCGGCGCAGCCACGCGCCTCACCGTTGGCCTCCGGGGGGCGC
GGCTGCATGTGATGCTGCCGGCGGGCGCAGATGTGCCTGTCGTCGGCGCCGGCATACGCCTTGCCTGGCAGCCCGACGAT
ATCCACTACATGGATGACGCGGCATGA

Protein sequence : 
MTPAVRFQQVSRHFGQVRAVDGVDLEIAPGEFFAMLGPSGSGKTTCLRLIAGFEQPTAGHIQIFGETADGVPPYRRNVNT
VFQDYALFPHLNILDNVAYGLMVKGVGKAERMKAAGDALELVKLPGYGARRPGQLSGGQRQRVALARALVNKPKVLLLDE
PLGALDLKLREQMQEELKSLQRALGITFVFVTHDQGEALSMADRVAVFNDGNIVQEGTPQDIYRRPKNRFVADFVGSSNV
IAPDLMASLGGERRWASLRPEAIRLAGDGVAAQVDNASFLGAATRLTVGLRGARLHVMLPAGADVPVVGAGIRLAWQPDD
IHYMDDAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 2e-26 42
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 1e-25 41
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 2e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rleg_3724 YP_002977506.1 ABC transporter BAC0162 Protein 2e-31 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rleg_3724 YP_002977506.1 ABC transporter VFG1206 Protein 4e-32 43
Rleg_3724 YP_002977506.1 ABC transporter VFG0344 Protein 2e-31 41