Gene Information

Name : Rleg_3453 (Rleg_3453)
Accession : YP_002977238.1
Strain : Rhizobium leguminosarum WSM1325
Genome accession: NC_012850
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 3484616 - 3485518 bp
Length : 903 bp
Strand : +
Note : PFAM: ABC transporter; SMART: AAA ATPase; KEGG: zinc ABC transporter

DNA sequence : 
ATGATTGAGCTTAGCAATCTTGTCCGGCCCGCATCCTCGGATGCGGGATCGGGGATCACGGTGAAGGACGCAACCGTCAC
TTACCGCAACGGACATACAGCCCTGAGGGACGCGAGTTTCCAGATCCCCACGGGCACGATCGCCGCGCTGGTCGGTGTCA
ACGGTTCCGGCAAGTCGACGCTCTTCAAGTCGATCATGGGTTTCGTGCGTCTCGCCAGGGGCCACATTCGCGTGCTTGGC
ATCCCGGTCGAAGAGGCGCTGCGCAAGAACCTCGTCACTTATGTGCCGCAATCGGAAGAAGTCGACTGGAACTTCCCGGT
GCTGGTCGAGGATGTTGTGATGATGGGCCGCTACGGCCACATGGGCATGATGCGCATCCCGAAGGCCGCAGACCACGAGG
CAGTGGCGGCCGCGCTCGCCCGCGTCGCCATGAGCGAGTTCCGCAAGCGCCAGATCGGCGAACTCTCCGGCGGCCAGCGG
AAGCGGGTCTTCTTGGCGCGAGCACTGGCGCAGGACGGCCGGGTCATTCTGCTCGATGAACCCTTTACCGGCGTCGACGT
AAAGACCGAGGACCAGATCATCAAGCTCCTGCGCGAACTGCGGGATGAAGGCCGCGTCATGCTGGTCTCCACCCACAATC
TCGGCTCCGTGCCGGAGTTCTGCGACCGGACCATCCTGATCAAGGGCACGGTGCTCGCCTACGGCCCGACCGTCGAGACT
TTTACGCAGGAAAATCTGGAAAAGGCATTTGGCGGCGTGCTGCGACATTTCGTGTTGAGCGAAGCGCAGAACGGCAGGCC
AACGTCGATCGGCGTCATAACTGATGATGAGCGCCCCCTGATTCTGCAGGGTGGCAGAGCGACTGCCCGGAGGCCCGATA
GTGGCAACGGGGGCCGGGAATGA

Protein sequence : 
MIELSNLVRPASSDAGSGITVKDATVTYRNGHTALRDASFQIPTGTIAALVGVNGSGKSTLFKSIMGFVRLARGHIRVLG
IPVEEALRKNLVTYVPQSEEVDWNFPVLVEDVVMMGRYGHMGMMRIPKAADHEAVAAALARVAMSEFRKRQIGELSGGQR
KRVFLARALAQDGRVILLDEPFTGVDVKTEDQIIKLLRELRDEGRVMLVSTHNLGSVPEFCDRTILIKGTVLAYGPTVET
FTQENLEKAFGGVLRHFVLSEAQNGRPTSIGVITDDERPLILQGGRATARRPDSGNGGRE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 3e-79 75
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 3e-79 75
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 6e-79 74
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 5e-79 74
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 3e-79 74

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rleg_3453 YP_002977238.1 ABC transporter BAC0350 Protein 2e-79 74
Rleg_3453 YP_002977238.1 ABC transporter BAC0440 Protein 1e-69 63
Rleg_3453 YP_002977238.1 ABC transporter BAC0400 Protein 3e-42 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rleg_3453 YP_002977238.1 ABC transporter VFG0526 Protein 2e-79 74