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Name : ureC (Rleg_3307) Accession : YP_002977093.1 Strain : Rhizobium leguminosarum WSM1325 Genome accession: NC_012850 Putative virulence/resistance : Virulence Product : urease subunit alpha Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0804 EC number : - Position : 3310156 - 3311868 bp Length : 1713 bp Strand : - Note : ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alp DNA sequence : ATGCCCTACAAGATCTCGCGCGCCGCCTATGCCGGCATGTTCGGACCGACCACCGGCGACAAGGTGCGCCTTGCCGATAC GGAGCTCTTCATCGAGATCGAGAAGGATTTCACCACCTATGGTGAGGAGGTGAAGTTCGGCGGCGGCAAGGTGATCCGCG ACGGCATGGGCCAGAGCCAGGTGACGCGGGCGGATGGCGCGGTCGATACGGTCATCACCAATGCGGTGATCGTCGATCAT TCGGGTATTTACAAGGCCGATATCGGGCTCAAGGATGGGCGCATCGTCGCGATCGGCAAGGCCGGTAATCCCGACATGCA GCCGGGTGTCAACATCATCGTCGGCCCCGGCACGGAGGCGATCGCCGCCGAAGGCAAGATCGTCACCGCTGGCGGCATGG ACAGCCATATCCATTTCATCGCGCCGCAGCAGATCGAGGAAGCGCTGATGAGCGGCATGACCTGCATGCTCGGCGGCGGC ACCGGACCGGCACACGGCACGCTTGCCACCACCTGCACGCCCGGTCCCTGGCATCTGGCGCGCATGATTGAAGCCGCCGA CGCCTTTCCGATGAACCTTGCCTTTGCCGGCAAGGGCAATGCCTCGCTGCCGGGGGCGCTGACCGAAATGGTGCTGGCCG GCGCCACCTCGCTGAAGCTGCACGAGGATTGGGGTACGACGCCAGGCGCCATCGACTGCTGCCTGTCGGTTGCCGACGAA TACGACGTGCAGGTGATGATCCATACCGACACGCTGAACGAAAGCGGCTTCGTCGAGGATACGATTGGCGCCATCAAGGG CCGCACCATCCATGCCTTCCATACGGAAGGGGCGGGCGGCGGGCACGCGCCTGACATCATCAAGATCTGCGGCCAGCCGA ATGTCATTCCGTCGTCGACCAATCCGACGCGTCCCTATACGGTCAATACCATTGCCGAGCATCTCGACATGCTGATGGTC TGCCATCACCTGTCGTCGTCGATCCCCGAAGATATCGCCTTTGCCGAAAGCCGGATCCGCAAGGAGACGATCGCCGCCGA AGACATCCTGCACGATATCGGCGCCTTCTCGATCATCTCGTCCGACAGCCAGGCCATGGGCCGCGTCGGCGAGGTGGCGA TCCGCACCTGGCAGACGGCTGACAAGATGAAGCGTCAGCGCGGCCGGCTGAAGGAGGAAAAGGGCGACAACGACAATTTC CGCGTCCGCCGCTATATCGCCAAATATACGATCAACCCGGCGATCGCCCATGGTCTCAGCCGTGAGATCGGCTCGGTTGA AGTCGGCAAACGTGCCGACCTCGTGCTTTGGAACCCGGCCTTCTTCGGGGTGAAGCCCGATATGGTGCTGCTCGGTGGCT CGATTGCGGCCGCCCCGATGGGCGATCCGAACGCCTCGATCCCGACGCCGCAGCCGGTACACTACCGGCCGATGTTTGCC TCCTATGGCAAGAGCCTCACCAATTCCTCCGTCACCTTCGTCAGCCAGGCCTCGCTCGATGCCGGCCTGAAGGGCCGGCT CGGCGTCGCCAAGGAGCTGGTCGCGGTGAAAAACACGCGCGGCGGCATCTCCAAGGCATCGATGATCCACAACGACCTGA CACCCGAGATCGAGGTCGATCCGGAGACCTATGAGGTCAGGGCGAACGGCGAGCTGCTGACTTGCGAGCCGGCGACGGTG CTGCCGATGGCGCAGCGCTACTTCCTGTTCTAG Protein sequence : MPYKISRAAYAGMFGPTTGDKVRLADTELFIEIEKDFTTYGEEVKFGGGKVIRDGMGQSQVTRADGAVDTVITNAVIVDH SGIYKADIGLKDGRIVAIGKAGNPDMQPGVNIIVGPGTEAIAAEGKIVTAGGMDSHIHFIAPQQIEEALMSGMTCMLGGG TGPAHGTLATTCTPGPWHLARMIEAADAFPMNLAFAGKGNASLPGALTEMVLAGATSLKLHEDWGTTPGAIDCCLSVADE YDVQVMIHTDTLNESGFVEDTIGAIKGRTIHAFHTEGAGGGHAPDIIKICGQPNVIPSSTNPTRPYTVNTIAEHLDMLMV CHHLSSSIPEDIAFAESRIRKETIAAEDILHDIGAFSIISSDSQAMGRVGEVAIRTWQTADKMKRQRGRLKEEKGDNDNF RVRRYIAKYTINPAIAHGLSREIGSVEVGKRADLVLWNPAFFGVKPDMVLLGGSIAAAPMGDPNASIPTPQPVHYRPMFA SYGKSLTNSSVTFVSQASLDAGLKGRLGVAKELVAVKNTRGGISKASMIHNDLTPEIEVDPETYEVRANGELLTCEPATV LPMAQRYFLF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ureC | NP_286680.1 | urease subunit alpha | Virulence | TAI | Protein | 0.0 | 70 |
| ureC | NP_287088.1 | urease subunit alpha | Not tested | TAI | Protein | 0.0 | 70 |
| ureC | YP_005682174.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 1e-166 | 62 |
| ureC | YP_003784325.1 | urease subunit alpha | Not tested | PiCp 7 | Protein | 1e-166 | 62 |
| ureC | YP_005686358.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 1e-166 | 62 |
| ureC | YP_005684266.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 3e-165 | 62 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ureC | YP_002977093.1 | urease subunit alpha | VFG0270 | Protein | 9e-171 | 65 |
