Gene Information

Name : Rleg_2902 (Rleg_2902)
Accession : YP_002976701.1
Strain : Rhizobium leguminosarum WSM1325
Genome accession: NC_012850
Putative virulence/resistance : Unknown
Product : ABC transporter
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG3839
EC number : -
Position : 2898818 - 2899819 bp
Length : 1002 bp
Strand : -
Note : PFAM: ABC transporter; TOBE domain protein; transport-associated OB domain protein; SMART: AAA ATPase; KEGG: ret:RHE_CH02894 sugar ABC transporter, ATP-binding protein

DNA sequence :
GTGGGATCGCTTCAACTCAAATCCATCCGCAAGACCTATGGCACGCATGAGGTGCTGAAAGGCATCGACCTCGAGGTCAA
GGACGGCGAATTCGTCATCTTCGTCGGGCCGTCGGGCTGCGGGAAATCGACGCTGCTACGCAGCATTGCAGGCCTCGAAG
ACGTCACGTCGGGCGCCGTCGTCATCAATGGCCGCGATGAGACGTTGACGCCGCCGGCCAAGCGCGGCATCGCGATGGTG
TTTCAGTCCTACGCGCTCTATCCGCATCTGACGGTCAAAGACAATATGGGGCTTGGTCTCAAGCAGGCCGGCACCGCCAA
GGATGAGATTGAAAGGCGCGTCGGCAAGGCATCCGGCATGCTGTCGCTGGAACCCTATCTGGCGCGGCGGCCGGCCGAGC
TCTCCGGCGGCCAGCGCCAGCGCGTCGCCATCGGCCGTGCTATCGTGCGCGAGCCGGAACTCTTCCTGTTCGATGAACCG
CTGTCGAACCTCGATGCGGCGCTGCGCGTCCAGACCCGCCTCGAAATCGCCCGGCTGCACCGCAGCCTGAAGGCGACGAT
GATCTATGTCACCCACGACCAGGTCGAGGCGATGACGCTTGCCGACAAGATCGTCGTCTTGAATGCCGGCGCGATCGAGC
AGATCGGTTCGCCGATGGAACTCTACAAACGACCGGCCAATGTCTTCGTTGCCGGCTTCATCGGCTCCCCGCAGATGAAT
TTCATCGCGGCCGAGAAGGTCGGCGATCACAGCGCCAAGACGATCGGCGTGCGTCCCGAACACCTGACGTTGTCGCGCGA
ACAGGGGACTTGGGCTGCTAAGGTCGTGCATGTCGAGCATCTCGGCGCCGACACGATCATCTATCTGGAATCCGAACAGT
GCGGCCTGTTGACCGCGCGTCTTTTCGGCGAACACCAATATGAGCCGGACGAGATCGTCTATGCGACGCCTGACCAGGCG
CATGTGCACCGCTTCGACGTCGACGACCAGGCGATCCGATAA

Protein sequence :
MGSLQLKSIRKTYGTHEVLKGIDLEVKDGEFVIFVGPSGCGKSTLLRSIAGLEDVTSGAVVINGRDETLTPPAKRGIAMV
FQSYALYPHLTVKDNMGLGLKQAGTAKDEIERRVGKASGMLSLEPYLARRPAELSGGQRQRVAIGRAIVREPELFLFDEP
LSNLDAALRVQTRLEIARLHRSLKATMIYVTHDQVEAMTLADKIVVLNAGAIEQIGSPMELYKRPANVFVAGFIGSPQMN
FIAAEKVGDHSAKTIGVRPEHLTLSREQGTWAAKVVHVEHLGADTIIYLESEQCGLLTARLFGEHQYEPDEIVYATPDQA
HVHRFDVDDQAIR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 3e-33 41
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 1e-33 41