Gene Information

Name : Rleg_1066 (Rleg_1066)
Accession : YP_002974900.1
Strain : Rhizobium leguminosarum WSM1325
Genome accession: NC_012850
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1039646 - 1040317 bp
Length : 672 bp
Strand : +
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: rec:RHECIAT_CH0001381 two-component response regulator protein

DNA sequence :
ATGCGCATCCTGGTAGTCGAAGACGACGTGAATCTGAACCGGCAGCTGGCCGACACGCTGAAGGAGGCGGGCTATGTCGT
CGACCAGGCGTTCGATGGCGAGGAAGGCCATTTCCTCGGCGACACCGAACCCTATGACGCCATCATCCTCGATATCGGCC
TGCCGGAGTTGGACGGGGTCACCGTTCTAGAAAAATGGCGTGGCGCCGGCCGCGGTGTGCCGGTGCTGATCCTGACGGCG
CGCGACCGCTGGAGCGACAAGGTCGCCGGCATCGATGCCGGTGCCGACGACTACGTCACCAAGCCCTTCCATGTCGAGGA
AGTGCTGGCCCGCCTTCGGGCGCTGATCCGGCGCGCGGCCGGGCATTCCTCATCCGAGATCATCTGCGGGCCGGTGCGGC
TCGATACCAAGTCCTCGAAGGCGACGGTCAACGGCACGACGCTGAAGCTGACCTCGCACGAATATCGCCTGCTTTCCTAT
CTCATGCACCACATGGGCGAGGTCGTTTCGCGCACGGAACTGGTCGAGCATATGTACGACCAGGATTTCGACCGTGATTC
CAACACGATCGAGGTCTTCGTCGGCCGCCTGCGCAAGAAAATGGGGGTCGACCTGATCGAAACGGTGCGCGGTCTCGGTT
ACCGCATCCAAGCGCCGAAACATGCGAATTAA

Protein sequence :
MRILVVEDDVNLNRQLADTLKEAGYVVDQAFDGEEGHFLGDTEPYDAIILDIGLPELDGVTVLEKWRGAGRGVPVLILTA
RDRWSDKVAGIDAGADDYVTKPFHVEEVLARLRALIRRAAGHSSSEIICGPVRLDTKSSKATVNGTTLKLTSHEYRLLSY
LMHHMGEVVSRTELVEHMYDQDFDRDSNTIEVFVGRLRKKMGVDLIETVRGLGYRIQAPKHAN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-25 44
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 6e-25 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rleg_1066 YP_002974900.1 transcriptional regulator NC_002516.2.879194.p Protein 4e-38 47
Rleg_1066 YP_002974900.1 transcriptional regulator CP000647.1.gene1136. Protein 1e-35 46
Rleg_1066 YP_002974900.1 transcriptional regulator BAC0530 Protein 1e-35 46
Rleg_1066 YP_002974900.1 transcriptional regulator CP001918.1.gene2526. Protein 4e-35 45
Rleg_1066 YP_002974900.1 transcriptional regulator CP001138.1.gene1939. Protein 5e-36 45
Rleg_1066 YP_002974900.1 transcriptional regulator NC_002695.1.913289.p Protein 3e-35 44
Rleg_1066 YP_002974900.1 transcriptional regulator CP000034.1.gene2022. Protein 7e-36 44
Rleg_1066 YP_002974900.1 transcriptional regulator CP004022.1.gene1005. Protein 7e-40 43
Rleg_1066 YP_002974900.1 transcriptional regulator BAC0111 Protein 3e-30 43
Rleg_1066 YP_002974900.1 transcriptional regulator BAC0487 Protein 1e-26 43
Rleg_1066 YP_002974900.1 transcriptional regulator BAC0347 Protein 1e-27 42
Rleg_1066 YP_002974900.1 transcriptional regulator BAC0308 Protein 4e-26 42
Rleg_1066 YP_002974900.1 transcriptional regulator BAC0083 Protein 1e-28 41
Rleg_1066 YP_002974900.1 transcriptional regulator BAC0197 Protein 8e-29 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rleg_1066 YP_002974900.1 transcriptional regulator VFG0475 Protein 4e-36 45
Rleg_1066 YP_002974900.1 transcriptional regulator VFG0596 Protein 4e-26 44
Rleg_1066 YP_002974900.1 transcriptional regulator VFG1390 Protein 5e-26 42
Rleg_1066 YP_002974900.1 transcriptional regulator VFG0473 Protein 9e-27 41
Rleg_1066 YP_002974900.1 transcriptional regulator VFG1389 Protein 2e-27 41