Gene Information

Name : Rpic12D_5188 (Rpic12D_5188)
Accession : YP_002973659.1
Strain :
Genome accession: NC_012849
Putative virulence/resistance : Unknown
Product : transposase IS3/IS911 family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2963
EC number : -
Position : 86702 - 87034 bp
Length : 333 bp
Strand : +
Note : PFAM: transposase IS3/IS911 family protein; KEGG: mca:MCA0906 ISMca2, transposase, OrfA

DNA sequence :
ATGAGTGAAAAGCAGGTGCGTGCGCAGTACACGCGAGAGTTCAAGCTGGAGGCTGTTCGGCAGGTGCGCTCGGGTCAGCC
GATTGCGGTGGTGGCCAAGGTACTGGGCATCCCCAAAGCGAGCCTGGGCAACTGGGTGCGGCTGTCAGCCAAGGGAGAAT
TGGACGGTGCGGGCGGTGGTGACAAGAGCATCCAAGTCTCGCCCGAGAAAATGGAGATTGCTCGGCTGCGCGCCGAGAAT
GCCCGGCTTCGCATGGAGCGTGACGTTGCAAAAAAAGCCGCGGCGTACTTCGCGCAGGACACGCTGCGAGGTACGCCTGG
ATTCACCAAATGA

Protein sequence :
MSEKQVRAQYTREFKLEAVRQVRSGQPIAVVAKVLGIPKASLGNWVRLSAKGELDGAGGGDKSIQVSPEKMEIARLRAEN
ARLRMERDVAKKAAAYFAQDTLRGTPGFTK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3576 NP_755451.1 hypothetical protein Not tested PAI I CFT073 Protein 2e-10 41
hp2 AAC61714.1 Hp2 Not tested PAI I CFT073 Protein 1e-10 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rpic12D_5188 YP_002973659.1 transposase IS3/IS911 family protein VFG1707 Protein 5e-11 41