Gene Information

Name : Rpic12D_5126 (Rpic12D_5126)
Accession : YP_002973600.1
Strain :
Genome accession: NC_012849
Putative virulence/resistance : Unknown
Product : Resolvase domain protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1961
EC number : -
Position : 28046 - 28639 bp
Length : 594 bp
Strand : +
Note : PFAM: Resolvase domain; KEGG: xcb:XC_2601 invertase/recombinase protein

DNA sequence :
ATGCGGACAAAAGGGGCGGCAATGGCACTGATCGGCTATGCGCGGGTATCGACGGAGAGTCAGCACGTCGATTTACAGAA
AGACGCGCTGCGCAAGGCGGGCTGCGAGCGGGTATTTGAGGACATCATCAGCGGCGCGAAAAAAGAGCGGCAAGGTCTGG
ATGCAGCGCTGGCCTATTTGCGCGAAGGTGATGCCCTCGTCGTGTGGAAACTCGACCGCTTAGGCCGCTCGATGGTTCAC
TTGGTCAATACCGTGCAAGGCTTGGCCGCACGCGGTGTCGGCCTCAAGGTGCTAACGGGACAAGGCGCAGCTATCGACAC
CACCACGGCCCCCGGCAAGCTGGTCTTCGGGATTTTTGCGGCCCTCGCCGAGTTTGAGCGCGACCTGATCCGCGAGCGCA
CCAAAGCTGGGTTGACCGCTGCTGCCGCACGCGGTCGCAAGGGCGGGCGCAAGCCGGTCGTCACCGCAGACAAGCTACAG
CGGGCGCGGGAGCACATCGCAAACGGGCTGAACGTCCGCGAGGCCGCCACGCGGCTTAAGGTGAGCAAGACGGCTCTATA
CGCTGCGCTGCAAAGCGGGAGCGAGCAACGATGA

Protein sequence :
MRTKGAAMALIGYARVSTESQHVDLQKDALRKAGCERVFEDIISGAKKERQGLDAALAYLREGDALVVWKLDRLGRSMVH
LVNTVQGLAARGVGLKVLTGQGAAIDTTTAPGKLVFGIFAALAEFERDLIRERTKAGLTAAAARGRKGGRKPVVTADKLQ
RAREHIANGLNVREAATRLKVSKTALYAALQSGSEQR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDBH8_0918 YP_005160010.1 transposase-like protein Not tested Not named Protein 3e-30 53
res AGF34985.1 resolvase Not tested SGI1 Protein 2e-28 53
res AGF35025.1 resolvase Not tested SGI1 Protein 2e-28 53
res AGF35059.1 resolvase Not tested SGI1 Protein 2e-28 53
res AGK06929.1 resolvase Not tested SGI1 Protein 2e-28 53
res AGK06966.1 resolvase Not tested SGI1 Protein 2e-28 53
res AGK07012.1 resolvase Not tested SGI1 Protein 2e-28 53
res AGK07070.1 resolvase Not tested SGI1 Protein 2e-28 53
res AAK02044.1 resolvase Not tested SGI1 Protein 2e-28 53
tnpR ACD85600.1 TnpR resolvase Not tested SGI2 Protein 2e-28 53
binR YP_254224.1 resolvase/integrase BinR Not tested ¥ðSh1 Protein 6e-29 46
SH1761 YP_253676.1 DNA-invertase Not tested ¥ÕSh1 Protein 6e-29 46
binL YP_254524.1 DNA-invertase Not tested ¥ðSh2 Protein 6e-29 46