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Name : Rpic12D_5352 (Rpic12D_5352) Accession : YP_002973820.1 Strain : Genome accession: NC_012849 Putative virulence/resistance : Resistance Product : heavy metal translocating P-type ATPase Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2217 EC number : - Position : 240388 - 242787 bp Length : 2400 bp Strand : + Note : TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: rme:Rm DNA sequence : GTGAGCGAATGCGGCCCGAAGGGATGCGATTGCGCTGCTGTCAACGTGGCGCCTCCGGCCCCCGATGCAACTGGCGTCGA TTTGAAGCGCTCGCGCTACCGGATCGACAACATGGATTGCCCAACCGAGGAAGCGCTCATTCGCAACAAGCTGGCGACGT TGCCTGGGGTGGTGAAGCTTGAGTTCAATCTGGTACAGCGTTCGCTGACCGTCAATCACCGGCTGCCGTCCCCGGCCTCA ATCGAACAGGCGTTGTCGGCCATTGGCATGCAAGCCGTGCGCGCGGAAGAGACGCGTTCCGCGCAAAGCACGGTCCTGAC CATCCGGCAGATGGACTGTCCCACTGAGGAAGCACTGATTCGGGGCAAGCTGGCGGGCGTGCCGGGTGTGGCCGGTCTTG ATTTCAACCTCGTTCAGCGCACGCTGGCGGTCCGTCACGCTGCGCACACGTTGCCCCAAGTATTGGCCGCCATCCAATCG CTTGGCTTCGATGCCGAGGTCCGCGACACCTCCGCTGCCGCACCCGCTTCTGTGCCGGATGCCGCGCCCACCAAATGGTG GCCGCTTGCCATTTCCGGGGCGAACGCCGTACTGGCGGAGGTCGTCTATTGGCTCAACGGTGGCAATCACTGGGTGGTGG TGGTCCTGGCATTAGCCGCGATCCTGACCGGCGGGCTCACCACCTACAAGAAAGGCTGGATCGCGCTCAAGAACCGCAAC CTGAACATGAGTGCCCTCATGTCGATTGCGGTGACGGGCGCGATGGTGATCGGCCACTGGCCGGAAGCAGCGATGGTGAT GGTCTTGTTCGCGCTGGCCGAAGTCGTCGAAGCCCGGTCGCTGGATCGTGCGCGTGACGCGATCCGTGGTTTGATGGATC TCGCGCCCGAGACCGCCATGGTTCAGCGCAGCGATGGGAGCTGGGGCGACGTCGATGCCAAGACCGTTGCCGTCGGCAGC CGGGTGCGGGTCAAGCCGGGCGAGCGCATCGCGCTCGATGGCGAGGTGCTGCAGGGGCGCTCCTCCGTGAACCAGGCACC GATTACGGGCGAGAGCCTGCCGGTCGAGAAGGCGGAAGGCGACCCGGTGTTCGCCGGCACCATCAACGAGTCCGGATCGT TCGAGTACCGCGTCACCGCGGCGGCAAGCGACTCTACGCTGGCACGCATCATCCACGCAGTGGAGGCTGCTCAAGGCAGT CGCGCACCCACGCAGCGTTTCGTTGATCAGTTCGCCCGGCTGTACACCCCCATCGTCTTCGCCGTCGCGCTGGCGGTGGC CATCTTGCCGCCGCTCCTGTTCGGTGCCGCCTGGCTGGATTGGATCTACAAGGCCCTCGTACTGCTGGTGATCGCGTGTC CCTGCGCCCTCGTGATTTCGACGCCGGTGAGCATCGTGAGCGGCCTGGCCGCCGCCGCGCGACGCGGCATCCTGATCAAG GGCGGGGTCTATCTCGAAGAGGGGCGCAAGCTGAAATGGTTGGCGCTCGACAAGACCGGCACCATCACACACGGCAAGCC GGCGCTCACCGATGTCATGGCCTGGAACGGCACAGACCCCTCGGCCGCCGAGAGGCTTGCCGCCAGCCTGGCGATTCGCT CCGACCACCCCGTCTCTCAGGCGGTGGCCCGCGCAGCGCAGGACAAAGGTCTCACCCCAGGCGAGGTCGCCGATTTCGCG GCCATGCCTGGGCGCGGCGTCCGGGGCCATATCGACGGTGCGCTCTATCACTTGGGCAATCATCGCCTGGTTGAGGAACT CGGGGTGTGCTCGCCGGCATTGGAAACCAACCTTGCCACCCTCGAAACCCAGGGCAAAACCGTCGTGATGCTGATCGGCC CGGACGGCGTACGCGCGCTGTTCGGCGTGGCCGACACCATCAAGGACAGCAGTCGCCAGGCGATCAAGGACCTGCACGCG CTGGGCATCAAAACCGTGATGCTCAGTGGTGACAACCCGCACACCGCGGAGGCGATCGCGCAGCAAGTGGGTATCGACAA AGCTCGGGGCAACCTGCTACCGGAAGACAAGCAGCGCGAAATCGAGCAGCTATCGGCACAGGGAACCATCGGCATGGTCG GCGATGGCATCAACGACGCGCCGGCGCTGGCACGGGCCGATATCGGTTTCGCGATGGGGGCCGCCGGGACGGACACGGCG ATCGAAACGGCCGACGTCGCGCTGATGGACGACGATCTGCGCAAGCTCCCGGCCTTTGTACGGCTATCCCGGTCCACGGC GGGAGTTCTGAAGCAGAACATTGCGCTGGCGCTCGGCATCAAGGTGGTGTTCCTGGTGCTGACCTTTACCGGCCAGGCCA CCATGTGGATGGCGGTGTTTGCCGACATGGGGGCCAGCCTGCTGGTGGTCGGCAACGGGCTGAGGTTGCTGCGCAAATGA Protein sequence : MSECGPKGCDCAAVNVAPPAPDATGVDLKRSRYRIDNMDCPTEEALIRNKLATLPGVVKLEFNLVQRSLTVNHRLPSPAS IEQALSAIGMQAVRAEETRSAQSTVLTIRQMDCPTEEALIRGKLAGVPGVAGLDFNLVQRTLAVRHAAHTLPQVLAAIQS LGFDAEVRDTSAAAPASVPDAAPTKWWPLAISGANAVLAEVVYWLNGGNHWVVVVLALAAILTGGLTTYKKGWIALKNRN LNMSALMSIAVTGAMVIGHWPEAAMVMVLFALAEVVEARSLDRARDAIRGLMDLAPETAMVQRSDGSWGDVDAKTVAVGS RVRVKPGERIALDGEVLQGRSSVNQAPITGESLPVEKAEGDPVFAGTINESGSFEYRVTAAASDSTLARIIHAVEAAQGS RAPTQRFVDQFARLYTPIVFAVALAVAILPPLLFGAAWLDWIYKALVLLVIACPCALVISTPVSIVSGLAAAARRGILIK GGVYLEEGRKLKWLALDKTGTITHGKPALTDVMAWNGTDPSAAERLAASLAIRSDHPVSQAVARAAQDKGLTPGEVADFA AMPGRGVRGHIDGALYHLGNHRLVEELGVCSPALETNLATLETQGKTVVMLIGPDGVRALFGVADTIKDSSRQAIKDLHA LGIKTVMLSGDNPHTAEAIAQQVGIDKARGNLLPEDKQREIEQLSAQGTIGMVGDGINDAPALARADIGFAMGAAGTDTA IETADVALMDDDLRKLPAFVRLSRSTAGVLKQNIALALGIKVVFLVLTFTGQATMWMAVFADMGASLLVVGNGLRLLRK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF C97 | AAN62190.1 | putative metal-transporting P-type ATPase | Not tested | PAGI-2(C) | Protein | 0.0 | 70 |
| unnamed | BAB47609.1 | cadmium resistance protein B | Not tested | Type-III SCCmec | Protein | 1e-121 | 49 |
| cadA | BAC57487.1 | Probable cadmium-transporting ATPase (Cadmium efflux ATPase) | Not tested | Type-IIIinv SCCmec | Protein | 1e-121 | 49 |
| SE0075 | NP_763630.1 | cadmium resistance protein B | Not tested | SCCpbp4 | Protein | 2e-119 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Rpic12D_5352 | YP_002973820.1 | heavy metal translocating P-type ATPase | BAC0298 | Protein | 0.0 | 80 |
| Rpic12D_5352 | YP_002973820.1 | heavy metal translocating P-type ATPase | BAC0455 | Protein | 5e-93 | 42 |
| Rpic12D_5352 | YP_002973820.1 | heavy metal translocating P-type ATPase | BAC0461 | Protein | 2e-86 | 42 |
