Gene Information

Name : Rpic12D_5317 (Rpic12D_5317)
Accession : YP_002973786.1
Strain :
Genome accession: NC_012849
Putative virulence/resistance : Unknown
Product : transposase IS3/IS911 family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2963
EC number : -
Position : 207161 - 207457 bp
Length : 297 bp
Strand : -
Note : PFAM: transposase IS3/IS911 family protein; KEGG: rme:Rmet_6073 transposase IS3/IS911

DNA sequence : 
ATGACAAGCAAGACAAAGCGGGCGCAGTACACGCTGGAATTCAAGCTGGAAGCGGTACGGCTGGTGAAGAGCGGGCAGAG
CATGGCAGTGGTTAGCGCGACCCTGGGCATCAGAGCGCAGACGCTGCATAACTGGGTCAAGGCGGAGCGGGAAGGCAAGC
TGACTGGTGCGGGTATGAAGCCGGTCAGCCCGGAGCAGATGGAGCTGGCCCGGCTTCGGGCGGAGGTGGCGCGCTTGAAG
ATGGAGCGCGATATTTTAAAAAAAGCCGCAGCATACTTTGCGAAGGAGTCGGTGTGA

Protein sequence : 
MTSKTKRAQYTLEFKLEAVRLVKSGQSMAVVSATLGIRAQTLHNWVKAEREGKLTGAGMKPVSPEQMELARLRAEVARLK
MERDILKKAAAYFAKESV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpJ AAD44752.1 TnpJ Not tested SHI-2 Protein 2e-11 44
unnamed AAQ07469.1 TnpJ-like protein Not tested Not named Protein 2e-11 44
c3576 NP_755451.1 hypothetical protein Not tested PAI I CFT073 Protein 4e-11 43
unnamed AAF09021.1 unknown Not tested SHI-O Protein 4e-11 43
unnamed AAF09029.1 unknown Not tested SHI-O Protein 4e-11 43
hp2 AAC61714.1 Hp2 Not tested PAI I CFT073 Protein 3e-11 43
Z1150 NP_286685.1 hypothetical protein Not tested TAI Protein 5e-08 42
Z1589 NP_287093.1 hypothetical protein Not tested TAI Protein 5e-08 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rpic12D_5317 YP_002973786.1 transposase IS3/IS911 family protein VFG1707 Protein 1e-11 43