Gene Information

Name : Rleg_5352 (Rleg_5352)
Accession : YP_002973516.1
Strain :
Genome accession: NC_012848
Putative virulence/resistance : Unknown
Product : ABC transporter-like protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG1123
EC number : -
Position : 762503 - 764137 bp
Length : 1635 bp
Strand : -
Note : PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: sme:SM_b20141 putative oligopeptide ABC transporter ATP-binding protein

DNA sequence :
ATGGCTGAACATCTTTTGGAAGTGCGTGACCTCTCGGTCGAGTTCCACACCGCCAGCGGGACCGTCAAGGCGGTGCAGGA
TGTCAGCTGGCATCTCGATCGCGGCGAGACGCTGGCGATCCTTGGGGAAAGCGGTTCGGGCAAATCCGTATCGGCCTCGG
CGATCATGAACCTGATCGACATGCCGCCCGGCAAGATCACCAGCGGCACCATTCTCCTCAACGGCCGCGACATGCTGAAA
ATGACGCCCGAGGAGCGGCGCTCGATCAACGGCGCCAAGATCGCCATGATCTTTCAGGACCCGCTCGCCCACCTCAATCC
GGTCTATCCGGTCGGCTGGCAAATCACCGAGATGATGACGACGCATGGCCAGTCGGCGGAGCGCGCCGGCGCGAGGGCAC
TCGAATTGATCGGGCGCGTCGGCATAACCGATCCGCAGGCGGCGATGCGAAAATATCCATTCCAGTTCTCCGGCGGCCAG
CGACAACGCCTGATGATCGCCATGGCGATCGCCTGCAAGCCCGATATCTTGATCGCGGATGAACCCACCACCGCGCTTGA
TGTGACGGTGCAGGCGCAGGTGCTCGAACTTCTGCAGGAGTTGCAGCAGGAAACCGGCATGGGCCTGTTGCTGATCACCC
ACGATTTGGGCGTCGTTGCCGAGATCGCCGACCGGGTCGTGGTGATGAATTCCGGCTGCGTGGTCGAAACCGGCAATGCG
GCCGAAGTCTATCGCAACCCGCAGAACGCCTATACGAAGAAGCTGATAGCTGCCGCGCCGGGGAAGGGTGCGATGGCGCA
AGAGCGTGACCGGCAGGGCGAACCGTTGCTGCGCGCCATCGGCCTGAAAAAGAGTTTCGGCGCATTCCAGGCGCTGAAGG
GCGTGGACTTCGTCATCATGCCCGGCGAGACGGTTGCCGTTGTCGGCGAGAGCGGTTCCGGCAAGTCGACCCTTGCCCGG
GCAATCGTTCGCCTCGATGATCCGCAGGAGGGCCAGGTTCTCTATCGCGGCAACGATCTGCTTGCGATGACCCCAAGAGA
AATATTCGGGCTGCGTCGCGATTTGCAGATGGTCTTTCAGGACCCGACCCAGTCACTGAACCCGCGGATGAGCGTGTTCC
GGTTGATTTCCGAGGCCTGGGTCATTCACCCGGATATCCTGCCGAAGGCGAGATGGAAGGAGAGAGTGGCCGAGCTGCTG
GTCAAGGTTGGCCTGAAACCGGATATGGCCGACCGGTATCCACATCAGTTTTCCGGCGGCCAGCGCCAGCGCATCGCGAT
TGCCCGGGCGCTGGCGATGGAGCCGAAACTGATCATCTGCGACGAGGCGGTTTCGGCGCTCGACGTGTCGATCCAGGCGC
AGGTAATCGCCTTGCTTGAGGGCCTGCGTCGCGAATTCGGCCTGTCCTACCTCTTCATCGCACACGACCTGCCGGTGGTT
CGCGATTTCGCCGATCGTGTCATCGTCATGAAGGCCGGCGAGATTGTCGAGGAGGGGCCGGTCGAACAGATCTTCACCGC
GCCCTCCCACCCCTACACGCAGGCACTTCTTGCCGCGAGCCTCGATCCCGATCCGGAGATCCAGGCCACCCGACGCGCCG
CCCGCCAACTACAGGAAGGACTCGTTTCCGCATGA

Protein sequence :
MAEHLLEVRDLSVEFHTASGTVKAVQDVSWHLDRGETLAILGESGSGKSVSASAIMNLIDMPPGKITSGTILLNGRDMLK
MTPEERRSINGAKIAMIFQDPLAHLNPVYPVGWQITEMMTTHGQSAERAGARALELIGRVGITDPQAAMRKYPFQFSGGQ
RQRLMIAMAIACKPDILIADEPTTALDVTVQAQVLELLQELQQETGMGLLLITHDLGVVAEIADRVVVMNSGCVVETGNA
AEVYRNPQNAYTKKLIAAAPGKGAMAQERDRQGEPLLRAIGLKKSFGAFQALKGVDFVIMPGETVAVVGESGSGKSTLAR
AIVRLDDPQEGQVLYRGNDLLAMTPREIFGLRRDLQMVFQDPTQSLNPRMSVFRLISEAWVIHPDILPKARWKERVAELL
VKVGLKPDMADRYPHQFSGGQRQRIAIARALAMEPKLIICDEAVSALDVSIQAQVIALLEGLRREFGLSYLFIAHDLPVV
RDFADRVIVMKAGEIVEEGPVEQIFTAPSHPYTQALLAASLDPDPEIQATRRAARQLQEGLVSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 5e-72 43
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 5e-72 43
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 5e-72 43
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 5e-72 43
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 3e-88 42