Gene Information

Name : Rleg_4905 (Rleg_4905)
Accession : YP_002973085.1
Strain :
Genome accession: NC_012848
Putative virulence/resistance : Unknown
Product : transposase IS66
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 283792 - 285447 bp
Length : 1656 bp
Strand : -
Note : PFAM: transposase IS66; KEGG: xau:Xaut_5015 transposase IS66

DNA sequence :
ATGAGCGACGCGACTGATGAGCTTCCGGACGACCTTGCCAGTGCGCTTGCACTGCTGGCCGAGGAGCGTGCCCGGCGTAT
CACTGCCGAGGCAGAAGCTGCGATCGCCAAGGCGCAAGCCGCCAGCGCAAAGGCGCTCGTGTCGCATTCCGAAGCGCTGA
TCGCGCGGTTGAAGCTGGAGATCGAGAAGGTTCGCCGCGAACTTTACGGCAGCCGGTCAGAACGCAAGGCGCGACTCCTC
GAACAGATGGAACTGCAGCTCGAGGAGCTGGAAGCTGACGCTGGCGAAGACGAACTGGCGGCAGAGGTTGCGGCCAAAGC
CTCGACGGTCAGGGCTTTCGAGCGCAAGCGTCCATCACGGAAACCATTCCCTGAACATCTGCCGCGCGAGCGTGTCGTTA
TCGCGGCCCCGGCGAGCTGCCCTTGTTGCGGTTCGGGCAAGCTGTCGAAGCTGGGCGAAGACATCACCGAGACCCTGGAG
GTCATCCCGCGTCAGTGGAAGGTGATCCAAACGGTGCGGGAGAAGTTCACCTGCCGCGAATGCGAGAAGATCACCCAGCC
ACCAGCTCCTTTCCATGTGACGCCGCGGGGCTTTGCCGGGCCCAGCCTTCTGGCGATGATACTGTTTGAGAAGTTCGCGC
AGCATCAACCGCTGAACCGCCAGAGCGAGCGCTATGGCCGTGAGGGTATCGACCTCAGCCTGTCGACGCTGGCAGATCAG
GTCGGCGCTTGCGCCGCGGCGCTGAAGCCACTCCATGCGTTGATCGAAGCGCATGTCCTGGCTGCCGAGCGGCTGCATGG
TGACGACACCACAGTGCCGATCCTGGCGAAGGGAAAGACCGATACGGGTCGCATCTGGACCTATGTCCGAGATGACCGGC
CGTTCGGCGGGCAATCGCCGCCGGCGGCTCTCTACTATGCTTCGCGAGATCGACGACAAGAGCATCCCGAGCGCCACTTG
AAGACCTTCACCGGCATTCTGCAGGCTGATGCCTATGGCGGCTACAATCCGCTGTTCAAGGTAGACCGCGATCCGGGGCC
GCTGACGCAGGCGCTCTGCTGGTCGCACGCGAGGCGCAAGTTCTTCGTGCTGGCCGACATCGCCACGAATGCCAAACGCG
GCAGCCGCGCCGCGCCGATCTCGCCTATGGCGCTGGAAGCCGTCAAACGGATCGATGCGCTGTTCGACATCGAGCGTGAG
ATCAACGGACTTGCCGCCGATCAACGCCTGGAGCACCGTCGCAAGGGCAGCCTGCCGCTTGTCGGCGAACTGCACCGCTG
GCTTCAAACCGAGCGGGCAAAACTGTCGCGCAGTTCTCCCGTCGCCGAGCCGATCGACTACATGCTGAAGCGCTGGAACG
GCTTCGAGTCTTTCCTCGACGACGGCCGGATTTGTCTCACGAACAATGCCGCCGAGCGAGCGCTCAGGGGTTTTGCACTT
GGAAGGAAGTCGTGGCTCTTCGCCGGATCGGATCGCGGCGCTGATCGTGCCGCCTTCATGGTCACGCTGATCATGAGTGC
CAAGCTAAACGACATCGATCCGCAGGCCTGGCTTGCTGACGTCCTGGCCCGCATCGCCGACACGCCAATCAGTAAGCTGG
AGCAATTGCTTCCGTGGAATTGGCAGCCGCACGGACTGAACGCTCAAGCAGCCTAA

Protein sequence :
MSDATDELPDDLASALALLAEERARRITAEAEAAIAKAQAASAKALVSHSEALIARLKLEIEKVRRELYGSRSERKARLL
EQMELQLEELEADAGEDELAAEVAAKASTVRAFERKRPSRKPFPEHLPRERVVIAAPASCPCCGSGKLSKLGEDITETLE
VIPRQWKVIQTVREKFTCRECEKITQPPAPFHVTPRGFAGPSLLAMILFEKFAQHQPLNRQSERYGREGIDLSLSTLADQ
VGACAAALKPLHALIEAHVLAAERLHGDDTTVPILAKGKTDTGRIWTYVRDDRPFGGQSPPAALYYASRDRRQEHPERHL
KTFTGILQADAYGGYNPLFKVDRDPGPLTQALCWSHARRKFFVLADIATNAKRGSRAAPISPMALEAVKRIDALFDIERE
INGLAADQRLEHRRKGSLPLVGELHRWLQTERAKLSRSSPVAEPIDYMLKRWNGFESFLDDGRICLTNNAAERALRGFAL
GRKSWLFAGSDRGADRAAFMVTLIMSAKLNDIDPQAWLADVLARIADTPISKLEQLLPWNWQPHGLNAQAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 1e-85 45
BCAM0248 YP_002232880.1 putative transposase Not tested BcenGI11 Protein 4e-80 44
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 2e-87 43
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 1e-86 43
unnamed AAC31494.1 L0015 Not tested LEE Protein 2e-87 43
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 2e-87 43
tnp AEA34686.1 transposase Not tested Not named Protein 1e-87 43
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 2e-87 43
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 9e-87 43
unnamed CAI43806.1 hypothetical protein Not tested LEE Protein 4e-87 43
unnamed AAL57570.1 unknown Not tested LEE Protein 8e-88 43
Z4340 NP_289564.1 hypothetical protein Not tested OI-122 Protein 2e-81 43
aec53 AAW51736.1 Aec53 Not tested AGI-3 Protein 6e-80 43
Z1570 NP_287074.1 hypothetical protein Not tested TAI Protein 1e-86 42
Z1131 NP_286666.1 hypothetical protein Not tested TAI Protein 1e-86 42
Z1161 NP_286696.1 hypothetical protein Not tested TAI Protein 5e-82 42
Z1600 NP_287104.1 hypothetical protein Not tested TAI Protein 5e-82 42
unnamed AAL08460.1 unknown Not tested SRL Protein 6e-63 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rleg_4905 YP_002973085.1 transposase IS66 VFG0793 Protein 9e-88 43
Rleg_4905 YP_002973085.1 transposase IS66 VFG1051 Protein 4e-63 42
Rleg_4905 YP_002973085.1 transposase IS66 VFG1736 Protein 3e-65 41