Gene Information

Name : yfeC (Bgr_00860)
Accession : YP_002971149.1
Strain : Bartonella grahamii as4aup
Genome accession: NC_012846
Putative virulence/resistance : Virulence
Product : iron transport system membrane protein yfeC
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1108
EC number : -
Position : 119998 - 120864 bp
Length : 867 bp
Strand : -
Note : -

DNA sequence :
ATGATTTCTTGGTTGCTTGAGCCACTGAGCTATCAATATATGGTGAATGCAATGTGGGTTTCTGGATTAGTTGGGTGTGT
TTGTGCCTTTCTTTCAGCTTTTTTGATGTTAAAAGGTTGGTCATTAATTGGTGATGCTCTTTCCCATTCAATTGTTCCTG
GTGTAGCAGGAGCTTATCTTTTAGGATTACCTTTTTCACTCGGTGCTTTTTTTTCTGGTGGTCTTGCAGCAGCAGCAATG
CTCTTTTTTAACCACCGGACAAAGCTGAAAGAAGATACCATTATTGGGCTCATTTTTTCTTCCTTTTTTGCCTTTGGGTT
GTTTCTCAAATCATTAAAACCAATGGCTGTTAATATTGATACGATTGTTTTGGGAAATATTTTAGCCGTTAGTTCATCAG
ATATTCTACAATTGGCTTTTATCGGCTTTTTTTCGTTGCTTATATTGCTTTTGAAATGGAAAGATCTTCTTGTTTCGTTA
TTTGATGAAACGCATGCGCATGCCATTGGATTAAATGTAAAGTTTTTAAAGATTCTCTTTTTCACATTGCTTGCCGCTTG
TACTGTTGCTGCTATGCAAACCGTTGGAGCGTTCTTAGTCATTTGTCTTGTTGTGACACCTGGGGCAACAGCCTATCTTT
TAAGTGATCGTTTCGTGAATATCTTGGTTATTGCAGTTGTAATTGGAACATTCACAAGTGTCTTGGGTGTTTATGTGAGT
TATTTTTTAAATGCACAAACGGGGGGGGTTGTTGTGCTTTTTCAAGCATCTTTATTTGTTTTGGCTTTTATTTTTGCTCC
TAAACATGGGTATATTGCTGCGCGCTTACGCATAAATGCGGCAAAAAAGGGTGTAATATTATCATGA

Protein sequence :
MISWLLEPLSYQYMVNAMWVSGLVGCVCAFLSAFLMLKGWSLIGDALSHSIVPGVAGAYLLGLPFSLGAFFSGGLAAAAM
LFFNHRTKLKEDTIIGLIFSSFFAFGLFLKSLKPMAVNIDTIVLGNILAVSSSDILQLAFIGFFSLLILLLKWKDLLVSL
FDETHAHAIGLNVKFLKILFFTLLAACTVAAMQTVGAFLVICLVVTPGATAYLLSDRFVNILVIAVVIGTFTSVLGVYVS
YFLNAQTGGVVVLFQASLFVLAFIFAPKHGYIAARLRINAAKKGVILS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitC AAD41067.1 SitC Virulence centisome 63 pathogenicity island Protein 6e-68 70
sitC YP_217783.1 iron transporter: fur regulated Virulence SPI-1 Protein 8e-68 70
sitC NP_461784.1 permease Virulence SPI-1 Protein 8e-68 70
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 8e-68 70
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 8e-68 70
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 4e-29 42
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 4e-29 42
sitD NP_461785.1 permease Virulence SPI-1 Protein 2e-29 42
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 2e-29 42
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 4e-29 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfeC YP_002971149.1 iron transport system membrane protein yfeC BAC0351 Protein 4e-68 70
yfeC YP_002971149.1 iron transport system membrane protein yfeC BAC0441 Protein 2e-59 61
yfeC YP_002971149.1 iron transport system membrane protein yfeC BAC0352 Protein 1e-29 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfeC YP_002971149.1 iron transport system membrane protein yfeC VFG0527 Protein 3e-68 70
yfeC YP_002971149.1 iron transport system membrane protein yfeC VFG0528 Protein 9e-30 42