Gene Information

Name : nrdE (Bgr_02040)
Accession : YP_002971248.1
Strain : Bartonella grahamii as4aup
Genome accession: NC_012846
Putative virulence/resistance : Unknown
Product : ribonucleotide-diphosphate reductase subunit alpha
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG0209
EC number : -
Position : 295119 - 297269 bp
Length : 2151 bp
Strand : +
Note : Catalyzes the rate-limiting step in dNTP synthesis

DNA sequence :
TTGGAAACAATTGGTATAGGACAATCGCAGAAATCGGATCAGATTACTGATTATCATGCGCTGAATGCAATGCTTAATCT
TTATGATGAAAATGGTCATATTCAATTTGATATGGATCGGCTTGCCGCACGGCAATATTTTCTTCAGCATGTTAATCAAA
ATACAGTTTTTTTTCATAACTTGAAGGAAAAAATAGACTACTTAATTGAAGAAGGTTATTACGAAAAAGTTTTATTTGAG
CTTTATGATTTTTCTTTTATTAAAAAGCTTTTTAAACGTGCTTATGCATTTAAGTTTCGTTTCCCTACCTTTTTAGGCGC
ATTTAAGTACTATACCAGCTATACATTAAAGACTTTTGATGGGAAACGTTATCTTGAACGTTATGAAGATCGTGTCTGTC
TTGTAGCTTTATATTTGGCACAAGGGAATAAAGCTCTTGCTGAAAGTTTTGTGGATGAAATTATTACAGGACGGTTTCAG
CCGGCAACACCGACATTTTTAAATGCTGGGAAAAAACAACGTGGTGAATTGGTTTCGTGTTTTTTGCTACGTGTTGAAGA
TAATATGGAATCGATAGGTCGTTCGGTTAATTCGGCTTTGCAGCTTTCAAAACGTGGTGGAGGTGTGGCGCTTTGTTTAA
CGAATTTGCGGGAAGCTGGGGCACCAATTAAGCAAATAGAAAATCAGTCCTCAGGAGTCTTACCGGTGATGAAACTCTTG
GAAGATTCTTTTTCTTACGCCAATCAGCTTGGGGCACGACAGGGGGCTGGAGCTGTTTATTTGCATGCTCACCATTTAGA
TATTATGAAGTTTTTGGATACAAAGCGTGAAAATGCTGATGAAAAAGTTAGAATCAAAACGCTTTCGCTTGGTGTCGTTA
TTCCTGATATTACTTTTGAGCTTGCACGGAATAATGAGGACATGTATCTCTTCTCATCTTATGATATCGAGCGTGTGACA
GGTAAGCCCTTTAGCGATATTTCTTTAACGGAGCATTATCGTTCTTTTGTTGATAATGCAAAGATTCGTAAAAAGAAAAT
AAGTGCACGCGTTTTTTTCCAGACATTAGCAGAAATTCAATTTGAGTCGGGTTATCCCTATATTTTATTTGAGGATACTG
CTAATCGATCGAATCCAATAGCTGGGCGCATAAGTATGAGCAATTTATGTTCAGAAATTTTGCAGGTGAGTGAGGCAAGT
GAACTGGAGACAGATTTAACTTATCGCACGATTGGAAGTGATATATCCTGTAATCTTGGATCCATGAATATTGCCAAAGC
AATGGAAAGTCCTGATTTCGGACAGACCGTGGAATCTGCTGTTCGTGCTCTTACTGCGGTTTCGGATATGAGTAATATTG
CTTGTGTGCCTTCCATTGCGAAAGGCAATGCTGAAAGTCATGCGATTGGTTTGGGACAAATGAATTTGCATGGGTTTCTA
GCGCGTGAACAGATCTATTATGGGTCTCCAGAAGCGATAGATTTTACCAATATCTATTTTTATATTGTGACATATCACGC
CATACGAGCTTCCAATTTGATTGCACGTGAACGTCAAGAAATGTTTTCAGGGTTTGAAAAATCAGCTTATGCAGATGGAC
GTTTTTTCGAAAAATATATTGAAAAAGAATGGAAACCGCAATTTGCGCTTGTGCAAGAGCTTTTTGCACGGAACAATATT
GTTATCCCAGATCAAAAGGATTGGCAGGAACTTAAAAAATTAGTCATTGAGTATGGGCTTTATAACCGTAATTTGCAGGC
AGTTCCACCTACGGGATCTATTTCCTATATTAATCATGCCACTTCTTCTATTCATCCAATTGCTTCAAAAATTGAAATTC
GCAAAGAGGGAAAAATTGGGCGCGTTTATTATCCCGCTCCTTATATGGATAATACGAATTTGAATTTTTACCAAGATGCT
TATGAGATTGGTCCTGAAAAAATTATAGATACCTATGCTGCTGCAACACAGCATGTTGATCAAGGTCTTTCATTAACATT
ATTTTTTCCTGATACCGCTACCACACGTGATATTAACCGCGCACAAATTTATGCCTGGAAAAAGGGTATAAAGAGTATTT
ACTATGTACGATTACGGCAAGTAGCATTAAGTGGAACAGAAGTTGATGGCTGTGTTTCGTGCAGTTTATAG

Protein sequence :
METIGIGQSQKSDQITDYHALNAMLNLYDENGHIQFDMDRLAARQYFLQHVNQNTVFFHNLKEKIDYLIEEGYYEKVLFE
LYDFSFIKKLFKRAYAFKFRFPTFLGAFKYYTSYTLKTFDGKRYLERYEDRVCLVALYLAQGNKALAESFVDEIITGRFQ
PATPTFLNAGKKQRGELVSCFLLRVEDNMESIGRSVNSALQLSKRGGGVALCLTNLREAGAPIKQIENQSSGVLPVMKLL
EDSFSYANQLGARQGAGAVYLHAHHLDIMKFLDTKRENADEKVRIKTLSLGVVIPDITFELARNNEDMYLFSSYDIERVT
GKPFSDISLTEHYRSFVDNAKIRKKKISARVFFQTLAEIQFESGYPYILFEDTANRSNPIAGRISMSNLCSEILQVSEAS
ELETDLTYRTIGSDISCNLGSMNIAKAMESPDFGQTVESAVRALTAVSDMSNIACVPSIAKGNAESHAIGLGQMNLHGFL
AREQIYYGSPEAIDFTNIYFYIVTYHAIRASNLIARERQEMFSGFEKSAYADGRFFEKYIEKEWKPQFALVQELFARNNI
VIPDQKDWQELKKLVIEYGLYNRNLQAVPPTGSISYINHATSSIHPIASKIEIRKEGKIGRVYYPAPYMDNTNLNFYQDA
YEIGPEKIIDTYAAATQHVDQGLSLTLFFPDTATTRDINRAQIYAWKKGIKSIYYVRLRQVALSGTEVDGCVSCSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1481 YP_001800875.1 ribonucleotide-diphosphate reductase subunit alpha Not tested Not named Protein 0.0 74