Gene Information

Name : rplS (Bgr_19400)
Accession : YP_002972724.1
Strain : Bartonella grahamii as4aup
Genome accession: NC_012846
Putative virulence/resistance : Unknown
Product : 50S ribosomal protein L19
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0335
EC number : -
Position : 2234489 - 2234929 bp
Length : 441 bp
Strand : -
Note : this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site

DNA sequence :
ATGAATATTATCGCACAACTTGAAGCTGAACAATGTGCAAAAATTGAAGAAAAGCGCCAATTTCCAGCCTTTCAGCCAGG
AGATACAGTCCGTGTCATGGTGCGTGTGACGGAAGGTACGCGAACGCGTGTTCAGGCTTACGAAGGTGTTTGTATTGCGC
GTTCAGGCGGTGGGTTGAATGAGACCTTTACAGTACGCAAGATTTCTTATGGTGAAGGGGTGGAACGGGTGTTTCCTGTT
TATTCTCCGTTGGTTGAAGGTGTTGAGCTGGTGCGCCGTGGTAAAGTGCGCCGTGCAAAACTCTATTATCTTCGTGGTTT
GAGAGGTAAAGCTGCACGTATCGCTGAAAAGAGAGATTATCGGAAAAAAGCTGAAAAGGTTGTTGCGAAAGTAGAAGCAG
CAGCTGTAAGCACAGATGTTGAAAAGCAAGTTGCTGAGTAA

Protein sequence :
MNIIAQLEAEQCAKIEEKRQFPAFQPGDTVRVMVRVTEGTRTRVQAYEGVCIARSGGGLNETFTVRKISYGEGVERVFPV
YSPLVEGVELVRRGKVRRAKLYYLRGLRGKAARIAEKRDYRKKAEKVVAKVEAAAVSTDVEKQVAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rplS CAA68924.1 ribosomal protein L19 Not tested Internalin Protein 1e-28 61
rplS AAS66827.1 50S ribosomal subunit protein Not tested SSR-1 Protein 2e-25 57