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Name : rph (Balat_0286) Accession : YP_002969306.1 Strain : Bifidobacterium animalis DSM 10140 Genome accession: NC_012815 Putative virulence/resistance : Unknown Product : ribonuclease PH Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0689 EC number : - Position : 353044 - 353736 bp Length : 693 bp Strand : + Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs DNA sequence : GTGCGCATCACCCGCGCATTCACCGACGTGCCGGAAGGATCCGTGCTCATTGAATGCGGCAACACGCGCGTGATGTGCAC CGCCACGTTCACCGACACCGTGCCGCGCTGGCGCAAGGACTCCGGGCTCGGTTGGGTCACTGCGGAGTATTCGATGCTGC CGCGCGCCACCGCACAGCGCACCGACCGTGAATCGGTTCGCGGCAAGGTGGGCGGCCGCACCCATGAGATCTCCAGACTC ATCGGCCGATGCCTGCGCGGCGTGATTGACATGAAGGCGCTCGGCGAGAACACGATCCAGATGGATTGCGACGTGCTCCA GGCCGACGGCGGCACGCGCACCGCGTCGATCACCGGAGCGCACGTGGCCCTCGTGGACGCCCTCAACTGGGCGAAGCAGA ACGGCAAGATCAAAAGCGTGAAGAACGTGCTGCTCGACAGCGTCTCCGCCGTGTCGGTGGGCGTGATCGACGGCGAACCG ATGCTCGACCTGCCGTACGTCGAAGACAGCCGCGCAATGACCGACATGAACGTCGCAATGACCGGATCCGGCAAATTCGT TGAGATTCAGGGCACCGCCGAACATCGCCCATTCAGCCGCAACGAGCTCGGCGTGCTGCTCGACCTCGCCACCAAGGGCA ATAGGGAACTCCAAGCCGCACAGCAGGCCGCGCTCGACGCCGACCTGCGCTAG Protein sequence : MRITRAFTDVPEGSVLIECGNTRVMCTATFTDTVPRWRKDSGLGWVTAEYSMLPRATAQRTDRESVRGKVGGRTHEISRL IGRCLRGVIDMKALGENTIQMDCDVLQADGGTRTASITGAHVALVDALNWAKQNGKIKSVKNVLLDSVSAVSVGVIDGEP MLDLPYVEDSRAMTDMNVAMTGSGKFVEIQGTAEHRPFSRNELGVLLDLATKGNRELQAAQQAALDADLR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rph | YP_001800860.1 | ribonuclease PH | Not tested | Not named | Protein | 3e-58 | 63 |
