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Name : clpB (Balat_1481) Accession : YP_002970456.1 Strain : Bifidobacterium animalis DSM 10140 Genome accession: NC_012815 Putative virulence/resistance : Virulence Product : ATP-binding subunit of Clp protease Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1740976 - 1743663 bp Length : 2688 bp Strand : - Note : COG0542 ATPases with chaperone activity, ATP-binding subunit DNA sequence : ATGGAACAGAAATATACGACTTTGGCTCAGGAGGCCTTGGGCGACGCGGTGCAGAGCGCCTCGGCCGCCGGCAACCCGCA GGTTGAGCCGCTGCATTTGCTTGACTCGCTGCTGCGTCAGGAGAACGGTGTCATCGGTGGTCTCATCGAGGCCGTGGGGG CGAACAGGCAGACGATCGGCGCGCAGGTGCGCAATGCCCTGGTCTCGCTGCCGAGCGCTTCCGGCTCGTCGACCGCGCAG GCTTCGGCCAGCCGCCAGCTGACCACCGCGTTGGCCGACGCCAGCAAGGAAATGAAGGACATGGGAGATGAGTACATCTC CACCGAGCACCTGCTGCTGGGCATTCTCGACGCCGCCCCGAACGAGGCGGCCAAGATTCTCGAGCAGAACGGCATCACGG CCGACAAGGTGCGCGCGGCCATCCCGAACGTGCGCGGTGGCGCCAAGGTGACGAGCCCGGACGCCGAGGCCTCGTACAAG GCGTTGGAGAAGTTCTCCACCGACCTGACGGCCCGTGCCCGTGAAGGCAAGCTCGACCCGGTGATCGGCAGGGATCAGGA GATCCGCCGTGTGATCCAGATTCTGAGCCGCCGCACGAAGAACAACCCGGTGCTGATCGGCGAGCCAGGCGTGGGCAAGA CCGCCGTCGTGGAAGGCCTCGCCGAGCGCATCGTGGCCGGCGACGTGCCGAGCACACTGCAGAACAAGCGCCTCATCAGC CTCGACCTGGGCTCCATGGTGGCCGGGTCCAAGTACCGCGGCGAATTCGAGGAACGCCTCAAGGGCGTGCTTGACGAGAT CAAGCAGTCCGACGGCCAGATCATCACCTTCATCGACGAGATCCATACGATCGTCGGTGCCGGTGCGGCCGAAGGCTCGA TGGACGCGGGCAATATGCTCAAGCCTATGCTGGCCCGTGGCGAACTGCGCCTGATCGGCGCCACCACGCTCGACGAATAC CGTGAGAACATCGAGAAGGATCCGGCCCTGGAGCGTCGTTTCCAGCAGGTGTTCGTGGGCGAGCCGAGTGTGGAGGACAC GATCGCCATTCTGCGTGGCCTGAAGCAGCGCTATGAGGCCCACCACAAGGTGACGATCGGCGACGACGCGCTCGTGGCCG CCGCAACCCTCTCGAACCGCTACATCACCGGTCGTCAGCTGCCCGACAAGGCCATCGACCTGGTGGACGAGGCCGCTGCG CACCTGCGCATGGAACTCGACTCGCAGCCCGAGGAGATCGACGAGCTGCAGCGCAAGGTGACGCGCCTCGAAATGGAGGA GATGCAGCTGAAGAAGGCCGAGGACCCGGCCTCCAAGGAGCGCCTCGCCAAGCTCCAGAGCGAACTGGCCGACGCCCGCG AGAAGCTCGCAGGACTCAACGCCCGTTGGAACGCCGAGAAGGAAGGCCACAACAAGGTCGGCGACCTGCGTGCGCAGCTC GACGAGAAGCGCGTCGAGGCCGACAAGGCCACGCGTGAAGGCGACCTGGCGAAGGCGAGCCGCATTCTGTACGGTGAGAT CCCGGCCATTCAGAAGCAGCTGACCGAAGCCGAGCACGAGGCCGAGAAGGAAGCCGACTTCGCCCATGAGGATGAGCCCA TGGTCCCCGACCATGTGGACGCCGATTCGGTGGCCGGCATCGTCTCCGAATGGACCGGCATTCCGGTCGGCCGTCTCATG CAGGGCGAGAACGAGAAACTGCTCAACATGGAGGAATACCTCAACAGGCGCGTGATCGGCCAGCCGGAAGCCGTTCGTGC GGTCTCCGACGCCGTGCGCCGTTCGCGTGCAGGCCTGTCCGACCCGAATCGCCCGACCGGTTCGTTCCTGTTCATGGGCC CGACCGGCGTGGGCAAGACCGAGCTCGCCAAGGCGCTCGCCGAATTCCTGTTCGACGACGAGAAGGCCATGATCCGCATC GACATGTCGGAGTACATGGAGAAGTCGTCGGTCTCGCGTCTCATCGGCGCAGCCCCGGGCTATGTCGGTTACGAGGAGGG CGGCCAGCTCACCGAGGCCGTGCGTCGTCGTCCGTATTCGGTGGTGCTGTTCGACGAGGTGGAGAAGGCCAATTCCGAGG TCTTCGACATTCTGCTGCAGGTGCTCGATGACGGCCGCCTGACCGATGGTCAGGGCCGCACCGTGGACTTCAAGAACACG ATCCTGATCATGACGTCGAACCTCGGCTCGCAGTTCCTGGTCAACCCCGACCTGGATGAGCAGCAGAAGAAGGACGCCGT GATGAACGCGGTGCACAGCCAGTTCCGTCCGGAGTTCCTCAACCGTCTCGACGACATGGTGATCTTCCACCCGCTCACAC GCCAGGAGCTCGGCAAGATCGTCGACCTGCAGGTCAAGCAGGTGGCTTCGCGCCTCACCGACCGTCGCATCACGCTCGAC GTCACCGAAGCGGCACGCGAATGGCTTGCCGACACCGGCTACGACCCGGCATACGGTGCGCGTCCGCTGCGCCGTCTGGT GCAGACCGAGGTGGGCGACCAGCTGGCACGCATGCTGCTCGCCGGCGAGATCAAGGACGGTGACACCGTGCTGGTGGACC ACACCGGTGGCGAGCACCTCGAGCTCACCGACCATACGCACAACCCGATGGAAGGCGACCCGAACCCTGGAGACTCCCAG ATCACGGTTGACGACAAGAAGGATGACGGCGAACAGAAGGACGCCTGA Protein sequence : MEQKYTTLAQEALGDAVQSASAAGNPQVEPLHLLDSLLRQENGVIGGLIEAVGANRQTIGAQVRNALVSLPSASGSSTAQ ASASRQLTTALADASKEMKDMGDEYISTEHLLLGILDAAPNEAAKILEQNGITADKVRAAIPNVRGGAKVTSPDAEASYK ALEKFSTDLTARAREGKLDPVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAVVEGLAERIVAGDVPSTLQNKRLIS LDLGSMVAGSKYRGEFEERLKGVLDEIKQSDGQIITFIDEIHTIVGAGAAEGSMDAGNMLKPMLARGELRLIGATTLDEY RENIEKDPALERRFQQVFVGEPSVEDTIAILRGLKQRYEAHHKVTIGDDALVAAATLSNRYITGRQLPDKAIDLVDEAAA HLRMELDSQPEEIDELQRKVTRLEMEEMQLKKAEDPASKERLAKLQSELADAREKLAGLNARWNAEKEGHNKVGDLRAQL DEKRVEADKATREGDLAKASRILYGEIPAIQKQLTEAEHEAEKEADFAHEDEPMVPDHVDADSVAGIVSEWTGIPVGRLM QGENEKLLNMEEYLNRRVIGQPEAVRAVSDAVRRSRAGLSDPNRPTGSFLFMGPTGVGKTELAKALAEFLFDDEKAMIRI DMSEYMEKSSVSRLIGAAPGYVGYEEGGQLTEAVRRRPYSVVLFDEVEKANSEVFDILLQVLDDGRLTDGQGRTVDFKNT ILIMTSNLGSQFLVNPDLDEQQKKDAVMNAVHSQFRPEFLNRLDDMVIFHPLTRQELGKIVDLQVKQVASRLTDRRITLD VTEAAREWLADTGYDPAYGARPLRRLVQTEVGDQLARMLLAGEIKDGDTVLVDHTGGEHLELTDHTHNPMEGDPNPGDSQ ITVDDKKDDGEQKDA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 5e-164 | 46 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 6e-109 | 42 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 3e-110 | 41 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 2e-110 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_002970456.1 | ATP-binding subunit of Clp protease | VFG2084 | Protein | 2e-112 | 44 |
| clpB | YP_002970456.1 | ATP-binding subunit of Clp protease | VFG2076 | Protein | 5e-121 | 42 |
