Gene Information

Name : lysS (Balac_0437)
Accession : YP_002967879.1
Strain : Bifidobacterium animalis Bl-04
Genome accession: NC_012814
Putative virulence/resistance : Unknown
Product : lysyl-tRNA synthetase
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG1190
EC number : 6.1.1.6
Position : 516537 - 518153 bp
Length : 1617 bp
Strand : +
Note : class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA

DNA sequence :
GTGGCCGCCCCCGAGATGAGCACCGTGGAACGCGCGGAAATGCTGCTCAACCAGGACGAGGCGATTTTCAAGCGCGTGCA
GGAGGGCGCCTCGCTCGACGAGGCCGTGGATCCGTCGAACAAGGAATTCGGACCGCTCGCGCACCCGGAGCAGGTGCAGA
CCCGTGTGGCCAAGCGTGCGATGATGATCAAGGACGGTATCAATCCGTACCCGGTGAATCTCGACGTCACCACGACCATC
GACGCCGTGCGTGTCAAGTATGACGGCAAGCTCGAAGCGGGCGCCGAGACCGACGACATCGTCGGCGTGGCGGGCCGCGT
GCTGTTCATTCGCAATGCGGGCGGACTGTGCTTCGTGCAGCTCGCCGCCGGCGATGGCACGACGATCCAGGCCATGCTCT
CGAAGAAGCAGATCGGCGCGGATTCGCTCAAGCAGTTCAAGCAGCTGGTGGATCTGGGCGACCACCTGTTCGTCAAAGGT
CGTGTGATCGCATCGAAGACCGGCGAGCTGTCGATCTTCGCCGATGAGTGGGCCATCGCCGCCAAGGCGCTGCAGCCGCT
GCCGACGCTGCATAAGGAACTCAACGAAGACACCCGCACGCGCAAGCCGTACATCGGCATGATCGCCGACGAGAAGATTC
GCAACATGGTGCGCAATCGTTCCCGTGCGGTCGCCTCGCTGCGCCGCACCTTCGACGAACACGGATTCCTCGAGGTGGAG
ACTCCGATGCTGCAGACCATTCACGGTGGTGCCGCGGCTCGTCCGTTCACCACGCATATGAACGCCTTCGACCTTGATCT
CTACCTGCGCATCGCGCCCGAGCTCTTCCTCAAGCGCTGCCTCGTGGGTGGCATCGAGAAGGTGTTCGAGATCAACCGCG
ACTTCCGCAACGAGGGCGTGGACGCCACGCACGCGCCGGAATTCACGATGGTCGAGGCTTATGAGGCCTACGGCAACTAC
GACACGATCGCCAAGCTCGTCAAGGAGCTGATCCAGAAGACCGCCATCGACGTGTTCGGCTCCACCAAGGTGACGCTGCT
CGACGGCACCGAGTACGACTTCGGCGGCGAATGGAAGACGATGAGCATGTACGACTCGCTGTCGGAGGCGCTCGGCCAGC
AGATCACGCCGGAGACCAGCGTTGAGGAGCTCGGTGCGATCGCCGACCGTCTGGGCGTGGAGCGCGACGAGGTGGAGAAC
CACGGCAAGCTCGTCGAACACCTGTGGGAGCACTTCTACGAAGACAAGCTGTACGAGCCGACCTTCGTGCGCGACTTCCC
GGTGGAGACCTCGCCGCTTGTCAAGGCGCACCGCAGCAAGCCCGGCGTGGTGGAGAAGTGGGACCTCTACGTGCGCGGCT
TCGAGCTCGCGACCGGCTACTCCGAGCTCAACGACCCGATCGTGCAGCGTGAGCGCTTCGTGGCACAGGCCAAGGATGCT
CTCGCCGGTGACGAGGAGGCCTGCGACATCGATGAGGACTTCCTCGAGGCGCTCGGCGTCGGCATGCCGCCGGCAGGTGG
CATGGGCATGGGCATCGACCGTCTGCTCATCGCGCTCACCGGCGCCACGATCCGCGAGACGATCACGTTCCCGCTGGTCA
AGCCGCTCAACAACTGA

Protein sequence :
MAAPEMSTVERAEMLLNQDEAIFKRVQEGASLDEAVDPSNKEFGPLAHPEQVQTRVAKRAMMIKDGINPYPVNLDVTTTI
DAVRVKYDGKLEAGAETDDIVGVAGRVLFIRNAGGLCFVQLAAGDGTTIQAMLSKKQIGADSLKQFKQLVDLGDHLFVKG
RVIASKTGELSIFADEWAIAAKALQPLPTLHKELNEDTRTRKPYIGMIADEKIRNMVRNRSRAVASLRRTFDEHGFLEVE
TPMLQTIHGGAAARPFTTHMNAFDLDLYLRIAPELFLKRCLVGGIEKVFEINRDFRNEGVDATHAPEFTMVEAYEAYGNY
DTIAKLVKELIQKTAIDVFGSTKVTLLDGTEYDFGGEWKTMSMYDSLSEALGQQITPETSVEELGAIADRLGVERDEVEN
HGKLVEHLWEHFYEDKLYEPTFVRDFPVETSPLVKAHRSKPGVVEKWDLYVRGFELATGYSELNDPIVQRERFVAQAKDA
LAGDEEACDIDEDFLEALGVGMPPAGGMGMGIDRLLIALTGATIRETITFPLVKPLNN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lysS YP_005163386.1 lysyl-tRNA synthetase Not tested Not named Protein 2e-136 56