Gene Information

Name : MexAM1_META1p4502 (MexAM1_META1p4502)
Accession : YP_002965410.1
Strain : Methylobacterium extorquens AM1
Genome accession: NC_012808
Putative virulence/resistance : Virulence
Product : phoP: DNA-binding response regulator in two-component regulatory system with PhoQ
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 4610151 - 4610816 bp
Length : 666 bp
Strand : -
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pr : regulator

DNA sequence : 
ATGCGCATCCTCGTCGTAGAAGACGAGCCGCGCATCGCGGCCGATATCAGCGAGGGTCTGGAGCGGGCCGGCTACGTCGC
CGAGATCGTCGGCGACGGCGAGGCGGCGTGGTTCCGGGCCGAGACCGAGACCTACGACGCCATGGTGCTCGACCTCGGCC
TGCCGCGCCTCGACGGGCTGGGCGTGCTGCGCCGCCTGCGCGGAGCCGACGTGGCGCTCCCGGTGCTGATCCTCACCGCC
CGCGACGGCTGGCGCGAGCGGGTCGAGGGGATCGACGCGGGCGCCGACGACTACCTCGTCAAGCCGTTCCGGATGGAGGA
GCTGGTGGCACGGCTGCGCGCCATCCTGCGCCGCACCGCCGGCCACGCCTCCCCCGTCCTGCGGGCCGGCGCGGTCGAAC
TCGACACCCGCACCCGCGCGGTCTCGGTGGCGGGCCGCGAGACCGACCTCACCGCGCTCGAATACCGCCTGCTCGCCTTC
CTGCTCCACCGCCAGGGGCAGGTCGTGGCGGCGGGTGAGCTGCTCGACCATCTCCACGGCAGCGACAGCGACCGCGAGGC
CAACGCGCTGGAGGCCCTGCTGACCCGGCTGCGGCGCAAGCTCGGCCCCGGCATCATCGAGACCCGCCGCGGCCACGGCT
ACCTCGTGCCGTCCGATCCGCCGTGA

Protein sequence : 
MRILVVEDEPRIAADISEGLERAGYVAEIVGDGEAAWFRAETETYDAMVLDLGLPRLDGLGVLRRLRGADVALPVLILTA
RDGWRERVEGIDAGADDYLVKPFRMEELVARLRAILRRTAGHASPVLRAGAVELDTRTRAVSVAGRETDLTALEYRLLAF
LLHRQGQVVAAGELLDHLHGSDSDREANALEALLTRLRRKLGPGIIETRRGHGYLVPSDPP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 8e-23 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MexAM1_META1p4502 YP_002965410.1 phoP: DNA-binding response regulator in two-component regulatory system with PhoQ NC_002516.2.879194.p Protein 1e-33 45
MexAM1_META1p4502 YP_002965410.1 phoP: DNA-binding response regulator in two-component regulatory system with PhoQ BAC0197 Protein 3e-26 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MexAM1_META1p4502 YP_002965410.1 phoP: DNA-binding response regulator in two-component regulatory system with PhoQ VFG1390 Protein 2e-23 43
MexAM1_META1p4502 YP_002965410.1 phoP: DNA-binding response regulator in two-component regulatory system with PhoQ VFG0473 Protein 4e-24 41