Gene Information

Name : fixJ (MexAM1_META1p3740)
Accession : YP_002964727.1
Strain : Methylobacterium extorquens AM1
Genome accession: NC_012808
Putative virulence/resistance : Virulence
Product : LuxR family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG4566
EC number : -
Position : 3882034 - 3882642 bp
Length : 609 bp
Strand : -
Note : Evidence 2b : Function of strongly homologous gene; Product type r : regulator

DNA sequence : 
ATGGCCCCTGCCCTCGTGCATGTCATCGACGACGACCCCGCCATGCGCGACTCGGTCGCCTTCCTTCTCGATACGGCCGG
CTTCGACGTGCGGCTCTACGAGGCGGGAACGGCCCTGCTGGCGCGGCTCACGCGGCCGCTCCGGGGGTGCATCCTGACCG
ATATCCGCATGCCCGACCTCGACGGGTTGGCCCTGTTCCGCTCCCTCCGCTCGGCCGGTCACACGCTTCCCATCGTGATG
ATGACGGGGCATGGCGACGTGCCGCTCGCGGTGGAGGCGATGAAGCTCGGGGCCTGCGACTTCATCGAGAAGCCGTTTGA
TGGCGAGGCGCTCCTTCGGGCGCTGCAGGCCGCCCTGGAGCAGGGTGGGCATAACGGCTCGGTCGACCCGATCCTGCAGG
ACTTCATGCGGCGGTTGGCGACCCTGAGCGAGCGCGAGCGCCAGGTTCTCGATCATCTGGTGACCGGGGGCACCAGCAAG
GAGATCGGGCGAAGGCTCCGGATCAGCCCGCGAACCGTCGAGATCTACCGGGCCAAGGTCATGGCCAAGACGCGGGCGGG
AAGCCTGCAGGAACTGGTGCGCTGGGCCGTGCTCGCCGGCTTCGTGTGA

Protein sequence : 
MAPALVHVIDDDPAMRDSVAFLLDTAGFDVRLYEAGTALLARLTRPLRGCILTDIRMPDLDGLALFRSLRSAGHTLPIVM
MTGHGDVPLAVEAMKLGACDFIEKPFDGEALLRALQAALEQGGHNGSVDPILQDFMRRLATLSERERQVLDHLVTGGTSK
EIGRRLRISPRTVEIYRAKVMAKTRAGSLQELVRWAVLAGFV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrR CAB37412.1 TtrR Virulence SPI-2 Protein 1e-21 41
ttrR YP_216395.1 tetrathionate reductase complex: response regulator Virulence SPI-2 Protein 1e-21 41
ttrR NP_456141.1 putative two-component response regulator Not tested SPI-2 Protein 1e-21 41
ttrR NP_805058.1 two-component response regulator Virulence SPI-2 Protein 1e-21 41
ttrR NP_460352.2 response regulator Virulence SPI-2 Protein 1e-21 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fixJ YP_002964727.1 LuxR family transcriptional regulator VFG0488 Protein 4e-22 41