Gene Information

Name : fliP (MexAM1_META1p0343)
Accession : YP_002961572.1
Strain : Methylobacterium extorquens AM1
Genome accession: NC_012808
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 353797 - 354558 bp
Length : 762 bp
Strand : +
Note : Evidence 2b : Function of strongly homologous gene; Product type s : structure

DNA sequence :
ATGACCCCCTCCCCCAGCCGGCCCGTGCCGCGATCCCTCCCCCTGACGCTTCTCCTGGCCGCGCTGCTGCTGGCGGCTGG
CTCGGGCGCGGCGTGGGCGCAGAGCGTCACCCTCGATCTCGGTGCCGGCGGCACCACGGAACGGGCGTTGCAGCTCGTCG
CGCTGATCACGGTGCTGGCGCTCGCGCCCTCCGTGCTGGTGATGGCGACCTCGTTCACCCGGATCGTCGTGGTGCTGTCG
ATCCTGCGCTCGGCGCTCGGCACGCAGACCGCGCCGCCGAACACGGTGATGGTGAGTCTGGCCCTGTTCCTGACCGCCTT
CGTGATGGCGCCGACGGCGCGGGAGGCCTACCGGACCGGCGTCGAGCCGCTGATGGCGGGCCAGATCAGCCAGTCCCAGG
CGTTCGAGCGGGCGTCGGCGCCGTTCAAGACCTTCATGTTGCGCAACGTGCGCGAGAAGGACCTCAAGCTCTTCCTCGAC
ATGGCGCGCCAGCCGGCCCCGGCGGGCCCGGAAGCGATCGGCCTGGAAATCGTCACTCCCGCCTTCATGATCTCCGAGCT
GCGGCGCGCCTTCGAGATCGGCTTCCTCCTGTTCATCCCCTTCCTCATCATCGACCTCGTGGTCGCCTCGGTGCTGATGG
CGATGGGCATGATGATGCTGCCGCCGGCCACGGTCGCGCTGCCGTTCAAGCTGATCTTCTTCGTGCTGGTCGATGGGTGG
ACGCTGGTGGCGGGCTCCCTGATTCAGAGCTACGGAAGCTGA

Protein sequence :
MTPSPSRPVPRSLPLTLLLAALLLAAGSGAAWAQSVTLDLGAGGTTERALQLVALITVLALAPSVLVMATSFTRIVVVLS
ILRSALGTQTAPPNTVMVSLALFLTAFVMAPTAREAYRTGVEPLMAGQISQSQAFERASAPFKTFMLRNVREKDLKLFLD
MARQPAPAGPEAIGLEIVTPAFMISELRRAFEIGFLLFIPFLIIDLVVASVLMAMGMMMLPPATVALPFKLIFFVLVDGW
TLVAGSLIQSYGS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscR AAO18040.1 LscR Virulence TTSS locus Protein 2e-18 45
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 7e-19 42
hrcR BAB07862.1 HrcR Virulence Hrp PAI Protein 2e-18 41
hrcR AAP34349.1 HrcR Virulence Hrp PAI Protein 3e-19 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_002961572.1 flagellar biosynthesis protein FliP VFG2338 Protein 1e-33 54
fliP YP_002961572.1 flagellar biosynthesis protein FliP VFG2494 Protein 6e-37 54
fliP YP_002961572.1 flagellar biosynthesis protein FliP VFG1259 Protein 4e-33 52
fliP YP_002961572.1 flagellar biosynthesis protein FliP VFG2016 Protein 4e-28 48
fliP YP_002961572.1 flagellar biosynthesis protein FliP VFG0394 Protein 4e-20 45
fliP YP_002961572.1 flagellar biosynthesis protein FliP VFG0044 Protein 3e-17 44
fliP YP_002961572.1 flagellar biosynthesis protein FliP VFG0188 Protein 9e-21 43