Gene Information

Name : kdsB (MexAM1_META1p0233)
Accession : YP_002961472.1
Strain : Methylobacterium extorquens AM1
Genome accession: NC_012808
Putative virulence/resistance : Virulence
Product : 3-deoxy-manno-octulosonate cytidylyltransferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1212
EC number : 2.7.7.38
Position : 251731 - 252474 bp
Length : 744 bp
Strand : -
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 3023327; Product type e : enzyme

DNA sequence :
ATGTCCGATCCCCTGATCCTGATTCCGGCCCGCCTCGCCGCGACCCGGCTGCCGTCGAAGCCGCTCGCCGACATCGCGGG
CGTGCCGATGATCGTGCATGTCTGGCGCCGTGCCGTGGAAGCCGGCATCGGTCCCGTCGTGGTCGCCACCGACACCGACG
CGGTCGCCGAGGTGATCGAGGCGCAGGGCGGGCTGGCGGTGATGACCCGGCCCGACCACCCCTCCGGCTCGGATCGTCTT
GCGGAGGCGCTGGAGATCGTCGATCCCGACGGCAATCACGACGTCGTCGTCAACGTCCAGGGTGACCTGCCGACCATCGA
CCCGGCGATCATCGCCGCTTCGGTGATGCCGCTCGCCGACCCGCAGGTCGACATCGCCACTCTCTGCGCGGTGATCCACC
GGCCCGAGGAGATGGACGATCCCAACGTGGTCAAGATCATCGGCCACACGGTGGGACCCAACCGTCTGCGCGCGCTCGCC
TTCACCCGCGCCCGTGCCCCCTGGGGCGACGGGCCGCTGTTTCACCATATCGGACTCTACGCCTATCGCCGTAAGGCGCT
CGCGCGCTTCGTCGCCCTGCCGCAGGGCGAACTGGAGCAACGCGAGAAGCTGGAGCAGCTGCGCGCGCTGGAGGCCGGCA
TGCGCATCGACGCGATGATCGTCGAGGACCTGCCGCTCGGCGTCGACACCCCCGCCGACCTTGAGCGCGCCCGCACGCTG
CTCGCCATCCGCCGCCTGAACTGA

Protein sequence :
MSDPLILIPARLAATRLPSKPLADIAGVPMIVHVWRRAVEAGIGPVVVATDTDAVAEVIEAQGGLAVMTRPDHPSGSDRL
AEALEIVDPDGNHDVVVNVQGDLPTIDPAIIAASVMPLADPQVDIATLCAVIHRPEEMDDPNVVKIIGHTVGPNRLRALA
FTRARAPWGDGPLFHHIGLYAYRRKALARFVALPQGELEQREKLEQLRALEAGMRIDAMIVEDLPLGVDTPADLERARTL
LAIRRLN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsU YP_854332.1 3-deoxy-manno-octulosonate cytidylyltransferase Not tested PAI I APEC-O1 Protein 3e-26 42
kpsU AAZ04469.1 CMP-KDO synthetase Virulence PAI I APEC-O1 Protein 2e-26 42
kpsU CAE85213.1 KpsU protein Virulence PAI V 536 Protein 2e-26 42