Gene Information

Name : yejF (MexAM1_META1p1807)
Accession : YP_002962926.1
Strain : Methylobacterium extorquens AM1
Genome accession: NC_012808
Putative virulence/resistance : Unknown
Product : oligopeptide ABC transporter ATP-binding protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG4172
EC number : -
Position : 1881119 - 1882747 bp
Length : 1629 bp
Strand : +
Note : Evidence 2b : Function of strongly homologous gene; Product type t : transporter

DNA sequence :
ATGTCCGATACGCTGCTGACCGTCGAGGATCTCTCGGTCGCCTTCCACTCCGGCGAGCGCGAGACCCGCGCGGTGGATCG
CGTCAGCTTCGCCATCGAGCGGGGCGAGACCCTGGCGCTGGTCGGCGAATCCGGCTCCGGCAAATCGGTGACGGCGCTCT
CGATCCTGCGGCTGCTCGACGGCGCCGCCCATCACCCGGGCGGAAAGATCCTGTTCAAGGGGCGCGACCTCTTGGAGCTG
CCCGAGCGGGAGATGCGCGCGGTGCGCGGCGCGGACATCACCATGGTGTTCCAGGAGCCGATGACCTCGCTCAACCCGCT
CCACTCCATCCAGCGGCAGATCGGCGAAGTGCTGGAGATCCACCGCGGCCTGAAGGGCAAGGCGGCGCGGGCCCGCATCC
TCGAACTCATGGATCTCGTCGGCATCCGCGACGCCGAGCGGCGCCTCGGCGCCTATCCGCACGAATTGTCCGGCGGCCAG
CGCCAGCGCGTCATGATCGCGATGGCGCTCGCCTGCGAGCCCGATCTCCTGGTGGCCGACGAGCCGACCACCGCCCTCGA
CGTCACCGTGCAGGCGCAGATTCTCGCGCTGCTGGCCGACCTGCAGAAGCGGCTCGGCATGGCGATGCTGTTCATCACCC
ACGATCTCGGCATCGTCCGGCGCATCGCCGACCGGGTCTGCGTGATGCTTGCCGGCCGGATCGTGGAGGCGGGCCCGGTC
GATCGGGTCTTCACCCGGCCCCAGCACGAATACACGCAGCGGCTCCTGGCCGCCGAGCCCACCGGCCGGGCGAACCCCGT
GCCCGATCACGCCGAAGAGCTGGTCGAGGCCGGGCCGCTCAAGGTGTGGTTCCCCCTCAAGGCGGGGTTGCTCCGGCGCA
CCGTCGGCCACGTCAAGGCGGTCGATGGGGTACGGCTCAGGGTGCGGGCCGGCGAGACGGTCGGCGTCGTCGGCGAATCC
GGCTCGGGCAAGACCACGCTCGGCCTCGCCCTGCTGCGGCTCACCGAATCCGAGGGGCCGATCGTGTTCCTCGGGCAGCG
CATCGAGGCGCGCGGCCCCGCCCTGATGCGGCCCCTGCGCAAGGACATGCAGGTGGTCTTCCAAGACCCCTACGGCTCGC
TCTCGCCACGCATGTCGGCGGGCGACATCGTCGCCGAGGGGTTGGCCGTGCAGGGGCTGGTGAAGGGCGGCGACGAGCGC
CGCGCCCTGGTGGCGAAGGCGCTCACCGATGTCGGGCTCGATCCGGCAGCGATGGACCGCTACCCGCACGAATTCTCCGG
CGGCCAGCGCCAGCGCATCGCCATCGCCCGCGCCATCGTCCTGAAGCCCCGCTTCGTCGTCCTCGACGAGCCGACCTCGG
CGCTCGATCGCTCGGTGCAGGCGCAGATCGTGACGCTGTTGCGCGACCTCCAGCGCGAGCGGGGCATCGCCTACTTGTTC
ATCAGCCACGACCTCAAGGTGGTCCGCGCGCTCTCGAACTACGTCATGGTGATGCAGCACGGCCAGGTGGTCGAGGAGGG
CCCGGCCGAAGAGATCTTTGCCGCGCCGAAGACCGACTACACCCGCACCCTGTTCGCCGCGGCCTTCGAGATGGATGCCG
CGACCACCGCCGAGATCGAGCCGGCCTGA

Protein sequence :
MSDTLLTVEDLSVAFHSGERETRAVDRVSFAIERGETLALVGESGSGKSVTALSILRLLDGAAHHPGGKILFKGRDLLEL
PEREMRAVRGADITMVFQEPMTSLNPLHSIQRQIGEVLEIHRGLKGKAARARILELMDLVGIRDAERRLGAYPHELSGGQ
RQRVMIAMALACEPDLLVADEPTTALDVTVQAQILALLADLQKRLGMAMLFITHDLGIVRRIADRVCVMLAGRIVEAGPV
DRVFTRPQHEYTQRLLAAEPTGRANPVPDHAEELVEAGPLKVWFPLKAGLLRRTVGHVKAVDGVRLRVRAGETVGVVGES
GSGKTTLGLALLRLTESEGPIVFLGQRIEARGPALMRPLRKDMQVVFQDPYGSLSPRMSAGDIVAEGLAVQGLVKGGDER
RALVAKALTDVGLDPAAMDRYPHEFSGGQRQRIAIARAIVLKPRFVVLDEPTSALDRSVQAQIVTLLRDLQRERGIAYLF
ISHDLKVVRALSNYVMVMQHGQVVEEGPAEEIFAAPKTDYTRTLFAAAFEMDAATTAEIEPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 5e-80 44
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 5e-80 44
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 5e-80 44
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 5e-80 44
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 3e-83 43