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Name : TGAM_0629 (TGAM_0629) Accession : YP_002958995.1 Strain : Thermococcus gammatolerans EJ3 Genome accession: NC_012804 Putative virulence/resistance : Unknown Product : pyridoxal biosynthesis lyase PdxS Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0214 EC number : - Position : 599775 - 600782 bp Length : 1008 bp Strand : + Note : with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate DNA sequence : ATGGGAAAGCTCGACATTATTGAGAAGAAAGGTACCGAGAGACTGAAGAGGGGCTTCGCCAAGATGGTCAAGGGCGGAGT CATCATGGACGTCACCAATGCCGAACAGGCGAGAATCGCTGAGGAAGCCGGAGCAGTCGCAGTCATGGCCCTCCACCGCG TTCCAGCTGACATCAGAAAAGCTGGCGGAGTCGCGAGGATGGCCCCGATAGAGAAGATCCAGGAGATAATGGACGCAGTG ACCATTCCGGTTATGGCGAAGGTTAGGATCGGCCACGTCGCCGAGGCGAGAATCCTCGAAGCTTTGGGTGTTGACATGAT CGACGAGAGCGAAGTTCTGACGCCGTCTGACCCGTACTTCCACATCGACAAGCGCGAGTTCAAGATTCCCTTCGTCTGCG GCAACAGGAACCTCGGGGAGGCCGTCAGGAGGATATGGGAAGGGGCCGCGATGATGAGGACGAAGGGCGAAGCTGGAACA GGAAACATCATCGAGGCCGTCAGGCACGTCAGGCTTTTGAAGGACAACATCGCCCTGCTCCAGCGCATGACCGACGAACA GATCTACGGCGTCGCCGAGAAGTTCGCCGAGCCATACCTCAGGCTGGCCTTCGAGGTCAGGGAGATCAGCGGCCTGCCAA AGCAGGTCCTCGAGAACGAGCCGGTTTACGGCCACTACACCTACCGCGAGATCGTTGAGGGCCTCTACAAGATACTCCTC GAGATAAAGAAGCTTGGCCGCCTTCCGGTCGTTAACTTCGCCGCTGGAGGAGTTGCAACGCCCGCCGATGCCGCCCTGAT GATGCAGATGGGCATGGACGGCGTCTTCGTCGGTTCGGGCATCTTCAAGAGCTCCAACCCGCCGAAGATGGCGAGGGCCA TAGTCGAGGCCGTGAACCACTGGGACGAGCCCGATGTGCTCGTCGAGATAAGCAAGGAAATCGGCGAGCCGATGCGCGGT CAGGACATTGAGGAGCTTGAGGTTAGGCTCGAGGAGAGGGGCGTCTGA Protein sequence : MGKLDIIEKKGTERLKRGFAKMVKGGVIMDVTNAEQARIAEEAGAVAVMALHRVPADIRKAGGVARMAPIEKIQEIMDAV TIPVMAKVRIGHVAEARILEALGVDMIDESEVLTPSDPYFHIDKREFKIPFVCGNRNLGEAVRRIWEGAAMMRTKGEAGT GNIIEAVRHVRLLKDNIALLQRMTDEQIYGVAEKFAEPYLRLAFEVREISGLPKQVLENEPVYGHYTYREIVEGLYKILL EIKKLGRLPVVNFAAGGVATPADAALMMQMGMDGVFVGSGIFKSSNPPKMARAIVEAVNHWDEPDVLVEISKEIGEPMRG QDIEELEVRLEERGV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| DIP0227 | NP_938620.1 | pyridoxal biosynthesis lyase PdxS | Not tested | Not named | Protein | 5e-63 | 54 |
| pdxS | YP_005137204.1 | pyridoxine biosynthesis protein | Not tested | Not named | Protein | 4e-63 | 54 |
| pdxS | YP_005141805.1 | pyridoxine biosynthesis protein | Not tested | Not named | Protein | 6e-63 | 54 |
