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Name : kdpB (DMR_09270) Accession : YP_002952304.1 Strain : Desulfovibrio magneticus RS-1 Genome accession: NC_012796 Putative virulence/resistance : Unknown Product : potassium-transporting ATPase B chain Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2216 EC number : - Position : 1052313 - 1054382 bp Length : 2070 bp Strand : - Note : - DNA sequence : ATGACCAAGCATACCAAACGTCCGCTTTTTGATCCCTCCATTGTTCGCCAAGCCGGCCTCGACTGTTTGCGCAAGCTCGC ACCGGCCCGGCAGGCGCGCAATCCCGTCATGTTCACGGTCTACGTCGGCAGCATCCTGACCACGGTCCTGGCCGTCCAAG CGATACTTGGCCATGGCGAAGCCCCGGTCGGCTTCGTGGCCGCCGTCGCAGCCTGGCTGTGGGCGACCGTACTCTTCGCC AACTTCGCCGAGGCCATGGCCGAAGGCCGGGGAAAAGCCCAGGCCGCCGCCTTGCGGGGATTGCGCCGGGACGTGAGCGC CAAAAAGCTCGCATCCCCACGGCGCGACGCCGCTGTGGCCGAAGTCCCGGCCAGTTCTCTGCGCCGGGGTGACCTGTTCC TCGTCGAAGCCGGCGACACCATTGCTTCCGACGGCGAGATCGTGGAAGGTATCGCCTCGGTGGACGAGTCCGCCATCACG GGCGAGTCCGCCCCGGTCATCCGCGAGGCTGGCGGCGACCGCAGCGCCGTTACCGGCGGCACGCGCCTGCTTTCGGACTG GCTGGTGGTCAAGGTGGCGGCCGACGCCGGCGAGACCTTCCTCGACCGCATGATTTCCCTGGTCGAGGGCGCAAAACGCC GCAAGACGCCCAACGAGATCGCCCTCAATATCCTGCTTGCCTCCCTGACACTGATCTTCCTCATGGTCTGCGTGACGCTA CGCCCCATGTCGGCCTATGCCGTGTCTGCCGCCGGCCAGGGGCAGGCCGTAACCATCACCGCCCTGGCCGCGCTGTTTGT CTGCCTGGCCCCCACCACCATCGGCGGGCTGCTCTCGGCCATCGGCATCGCCGGCATGGATCGGCTGATTCAGGCCGGGG TCATCGCCACCTCGGGCAGGGCCGTGGAGGCCGCCGGCGACGTGGACGTGCTGCTGCTTGACAAGACCGGCACCATTACC CTCGGCAACCGCCAGGCCACCGCGTTCCTGCCGGCCAAGGGGATAGACGAACGCCAGTTGGCGGAAGTGGCCCAACTAGC CTCCCTGGCCGACGAGACGCCCGAGGGTCGGTCCATCGTGGTCCTGGCCAAGGAGCGCTTCGACATTCGCGGCCATGACC TGGAAGCCCTGGGCGCGACCTTCGTGCCGTTTACAGCCCAAACGCGTCTGTCCGGCGTCGATCTGTCGGGCCGCAGCATC CGCAAGGGTGCGGCCGACGCGGTCAAGGCCCTGGCCGAAGCTGCAGGCAACCGGATACCCGAAGAGGTTGAGCGCACCAT CCGCGAAGTGGCCAAATCCGGCGGTACGCCGCTGGTGGTGGCTGAAAATGGCAAGCCGCTTGGCGTCGTTTGGCTCAAAG ACATCGTCAAGGGCGGCATCCGCGAACGCTTTGCCGAGCTTCGGGCCATGGGCATCAAGACCATCATGGTCACGGGCGAC AATCCGCTGACGGCCGCCGCCATTGCCGCCGAGGCCGGGGTGGACGACTTCCTGGCCGAGGCCACGCCCGAGGCCAAGCT CGCCCGCATCCGCCAATACCAGGCCGAGGGCAAGATGGTGGCCATGACCGGCGACGGCACCAACGATGCCCCCGCCCTGG CCCAGGCCGACGTGGGCGTGGCCATGAATTCCGGCACCCAGGCCGCCAAGGAGGCCGGCAACATGGTGGACCTCGACTCC AACCCCACCAAGCTCCTGGAAGTCGTGGCCATCGGCAAGCAACTGCTTATGACGCGCGGCTCGCTGACCACCTTTTCCAT CGCCAACGACATCGCCAAGTACTTCGCCATCATCCCGGCCGTGTTCATCGGCATCTACCCGCAGCTGGCCCTGCTCAACG TCATGGGGCTGGCCACGCCGAAATCCGCCGTGCTCGCGGCCGTGGTCTTCAACGCCCTGATCATCGTCTTCCTCATTCCC CTGGCGCTTCGGGGCGTCAAATACGTGCCGGTTCCGGCCGTGGTCGCCCTGCGACGAAACCTCCTCGTCTATGGCCTGGG CGGACTGATCGTGCCGTTTGTCGGCATCAAATGCATCGACATGCTGATCGCGGCCCTCGGTTGGGCCTAA Protein sequence : MTKHTKRPLFDPSIVRQAGLDCLRKLAPARQARNPVMFTVYVGSILTTVLAVQAILGHGEAPVGFVAAVAAWLWATVLFA NFAEAMAEGRGKAQAAALRGLRRDVSAKKLASPRRDAAVAEVPASSLRRGDLFLVEAGDTIASDGEIVEGIASVDESAIT GESAPVIREAGGDRSAVTGGTRLLSDWLVVKVAADAGETFLDRMISLVEGAKRRKTPNEIALNILLASLTLIFLMVCVTL RPMSAYAVSAAGQGQAVTITALAALFVCLAPTTIGGLLSAIGIAGMDRLIQAGVIATSGRAVEAAGDVDVLLLDKTGTIT LGNRQATAFLPAKGIDERQLAEVAQLASLADETPEGRSIVVLAKERFDIRGHDLEALGATFVPFTAQTRLSGVDLSGRSI RKGAADAVKALAEAAGNRIPEEVERTIREVAKSGGTPLVVAENGKPLGVVWLKDIVKGGIRERFAELRAMGIKTIMVTGD NPLTAAAIAAEAGVDDFLAEATPEAKLARIRQYQAEGKMVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAGNMVDLDS NPTKLLEVVAIGKQLLMTRGSLTTFSIANDIAKYFAIIPAVFIGIYPQLALLNVMGLATPKSAVLAAVVFNALIIVFLIP LALRGVKYVPVPAVVALRRNLLVYGLGGLIVPFVGIKCIDMLIAALGWA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 1e-178 | 61 |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 9e-179 | 61 |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 7e-146 | 55 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 4e-144 | 54 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 4e-144 | 54 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 4e-144 | 54 |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 3e-144 | 54 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 4e-144 | 54 |
