Gene Information

Name : DMR_08160 (DMR_08160)
Accession : YP_002952193.1
Strain : Desulfovibrio magneticus RS-1
Genome accession: NC_012796
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 912831 - 913532 bp
Length : 702 bp
Strand : +
Note : -

DNA sequence : 
ATGGCCGCCGCCAAGACGCTCCTCGCCGCCAAAGGCGTGGCCAAGACCTTCCGCTTGGGCAAGGTGGAGGTCCCGGCCCT
GCGCGGCGTGGACCTGACCGTCGCGGCCGGCGAAGTGGCGCTGCTCATGGGGCCGTCGGGGAGCGGCAAGACCACGCTGC
TCTCCATCCTCGGCTGCATCCTGTCCCCCAGCGCCGGCAACGTGGCTGTCCTTGGCCGCGACACGGCCGGCTTGCCCGAG
GGGGAGCTGGCCAAGGTGCGTCTGGCCCACTTCGGCTTCATCTTCCAGGGCTACAACCTGTTTCCGACGCTTACGGCCGA
GGAGAACGTCCGGGTAGCCCTGGACCTGCGCGGCGTCAAGGGGGGCGACGCCGTGGAACGCTCGCGGCAGGCCCTTGACG
CCGTGGGCCTTGGCGACAAATACCGGATGCTGCCCCGCGATTTGAGCGGCGGCCAGAAGCAGCGCGTGGCCATTGCCCGG
GCGCTGGTGGCCGAACCCGATATCCTGCTTGCCGACGAGCCCACCGCCGCCCTGGATTCCGAGACCGGCAAGGCCGTCAT
CGCCATCCTTCGGGAGCTGGCCGTCACCCACGGCCGCTCGGTGGTCATCGTCACCCACGATCCCCGCATCGCCGCTTTCG
CCGACCGGGTGATCCGCATCGAGGACGGTCGCATCGTCGGCCAGGGACAGGAGGTCTCGTAA

Protein sequence : 
MAAAKTLLAAKGVAKTFRLGKVEVPALRGVDLTVAAGEVALLMGPSGSGKTTLLSILGCILSPSAGNVAVLGRDTAGLPE
GELAKVRLAHFGFIFQGYNLFPTLTAEENVRVALDLRGVKGGDAVERSRQALDAVGLGDKYRMLPRDLSGGQKQRVAIAR
ALVAEPDILLADEPTAALDSETGKAVIAILRELAVTHGRSVVIVTHDPRIAAFADRVIRIEDGRIVGQGQEVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-32 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-33 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-33 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-33 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DMR_08160 YP_002952193.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-34 46
DMR_08160 YP_002952193.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 7e-43 43
DMR_08160 YP_002952193.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 1e-35 43