Gene Information

Name : hemC (DMR_08080)
Accession : YP_002952185.1
Strain : Desulfovibrio magneticus RS-1
Genome accession: NC_012796
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : -
Position : 906378 - 907313 bp
Length : 936 bp
Strand : -
Note : transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis

DNA sequence :
ATGCGCGAAAAACTCGTCATCGCCACCCGAGGCAGCAAACTGGCCCTGTGGCAGGCCAACCACGTGGCCGACCGGCTGCG
CCAGACCCATCCGGGCTTGGCCGTGGACCTGCTCCCCATCAAGACCAAGGGCGACATCATCCTGGACGTGCCGTTGGCCA
AGGTGGGCGGCAAGGGGCTGTTCGTGAAGGAAATCGAGGAAGCCCTTCTCGACGGCCGGGCCGATCTGGCCGTGCATTCC
ATGAAGGACGTGCCTGCCGAACAGCCGGCCGGCCTGGTGGTCGGCATCGTGCCCGAGCGCGAGGACCCGTGCGACCGGCT
GCTGTCGGTGGCCTACGACTCCCTGGCCGCCCTGCCCCAGGGGGCCACGGTGGGCACGAGCAGCCTGCGCCGCAAGGCCC
AGCTGCTGGCCCTGCGCCCGGATCTGGCCATCGTGGACCTGCGCGGTAACCTGGACACCCGGGTCAAAAAGCTTCTCGAC
GGCCAGTTCGACGCCATCATCGTGGCCGCCGCCGGCCTCAATCGCCTGGAACTGTCCGCGCCAAAGGCCGTGCGCCTGGG
GCCGCCGGAGTTCCTGCCGGCCGCCGCCCAGGGGGCGCTGGGCATCGAATACCGCCTGGATGACCCGGAAACCGCCGCCA
TGCTGGCCTTTTTCGACCATCCCGAAAGCCACGACGCCGTGGCCGCCGAGCGCGGTTTCCTGGGACATCTGGAAGGCGGC
TGCCAGGTGCCCATCGCCGCCCACGCCGTCATCGACGGGGACATGATCCACCTGGAGGGCTTGGTGGCCGACCCGGAAAC
CGGCCAGACCTTCCGCGAAGCCGCCTCCGGCCCGCGCAGCCAGGCAACCGCCCTGGGCGTGGCCGTGGCCGAGGCCGTCC
TGGCCCGGGGCGCCAAGGCCGTGCTTGACGCCGTCTACAAGGCCGGCGCATCCTGA

Protein sequence :
MREKLVIATRGSKLALWQANHVADRLRQTHPGLAVDLLPIKTKGDIILDVPLAKVGGKGLFVKEIEEALLDGRADLAVHS
MKDVPAEQPAGLVVGIVPEREDPCDRLLSVAYDSLAALPQGATVGTSSLRRKAQLLALRPDLAIVDLRGNLDTRVKKLLD
GQFDAIIVAAAGLNRLELSAPKAVRLGPPEFLPAAAQGALGIEYRLDDPETAAMLAFFDHPESHDAVAAERGFLGHLEGG
CQVPIAAHAVIDGDMIHLEGLVADPETGQTFREAASGPRSQATALGVAVAEAVLARGAKAVLDAVYKAGAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 8e-66 57
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 8e-66 57