Gene Information

Name : fliQ (DMR_46210)
Accession : YP_002955998.1
Strain : Desulfovibrio magneticus RS-1
Genome accession: NC_012796
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein FliQ
Function : -
COG functional category : N : Cell motility
COG ID : COG1987
EC number : -
Position : 5239277 - 5239546 bp
Length : 270 bp
Strand : +
Note : -

DNA sequence :

ATGACCACGGATATGGTTGTCGCCCTGTCGCGCCAGGCCATCGAGCTGGCGCTGTTCCTGGCCCTGCCCATGCTCGGGGT
GAGCCTGGTCGTCGGCGTGTTCGTCTCGGTGCTCCAGGCGGCCACCCAGATTCAGGAAATGACCCTCACCTTCGTGCCGA
AGATCCTGTCCATGTTCATCGCGCTGCTCTTGGCCTTTCCCTGGATGATGGACAAGATGCTCAATTTTACGCGGGAGCTT
TTCATGAATATCCCGACGTATTTGCGCTGA

Protein sequence :

MTTDMVVALSRQAIELALFLALPMLGVSLVVGVFVSVLQAATQIQEMTLTFVPKILSMFIALLLAFPWMMDKMLNFTREL
FMNIPTYLR

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
ssaS	NP_456108.1	putative type III secretion protein	Virulence	SPI-2	Protein	9e-06	43
ssaS	NP_805091.1	type III secretion protein	Virulence	SPI-2	Protein	9e-06	43
ssaS	YP_216428.1	secretion system apparatus protein SsaS	Virulence	SPI-2	Protein	8e-06	43
ssaS	NP_460385.1	type III secretion system apparatus protein	Virulence	SPI-2	Protein	8e-06	43
ssaS	CAA68200.1	secretion system apparatus, SsaS	Virulence	SPI-2	Protein	6e-06	43

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
fliQ	YP_002955998.1	flagellar biosynthetic protein FliQ	VFG0520	Protein	2e-06	43
fliQ	YP_002955998.1	flagellar biosynthetic protein FliQ	VFG0043	Protein	2e-05	42