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Name : lysS (DMR_38510) Accession : YP_002955228.1 Strain : Desulfovibrio magneticus RS-1 Genome accession: NC_012796 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 4356802 - 4358334 bp Length : 1533 bp Strand : + Note : - DNA sequence : GTGGAGGACTTCCGTCCCCTGCTCGAAAGCCTGGACGCCCGCGACGAACTCAACGAAGTCTTCAAGAACCGCATCGCCAA GGCCGTCCAGCTCCTGGACGACGGCGTGCCGCTCTATCCCAACGACTTTGCCAAAGGCGACGACATCGGCCCGGTGGCCG AGGCCCACGAGCCCCTGACCGAGGAAGCCCTGGCCGAACTGGGCCGGACCTTCCGCCTGGCCGGCCGCATCGTGTCCCTG CGTTCGTTTGGCAAGGTGGCCTTTTTCACCATCCAGGACGCCTCGGGCCGCATCCAGGTCTTTGCCGAGCGCGAGACCCT TGGCCAGGAAGCCTACACGGTCTTCAAGAAATTCGACATCGGCGACATCGTCGGCGTCACGGGCCGGCTGTTTCGCACCA AGACCGGGGAACTGACGCTGCATGCCGACACGCTCTCCCTGGTCACCAAGTCCATGCGGCCCCTGCCCGAGAAGTACCAC GGCTTAAAGGACGTCGAGACCCGCTACCGCCAGCGCTACGTGGACCTCATCGTCACCCCGCGCTCGGTGGAGATCTTCAA GGCCCGCACCACCATCATCCGGGAACTGCGCGCCTTCCTCGACTCGTCGGGCTTTATGGAAGTGGAAACGCCCATGATGC AGGCCATCCCCGGCGGCGCCACGGCTCGGCCCTTCGTGACGCACCACAATGCCCTGGACATGGGCCTGTACATGCGCATC GCCCCGGAACTGTACCTCAAACGCCTGCTTGTGGGCGGCTTCGAGAAGGTCTACGAGGTCGGGCGCAACTTCCGCAACGA GGGCGTGTCCACCCGGCACAATCCCGAATTCACCATGTGCGAGTTCTACTGGGCCTACGCCCGGTACACCGACCTCATGG ACCTGACCGAGCGGCTGTTTGCCCGCCTGGCCAAGGCCGTCACCGGGTCGGAGGCGGTCAGCTACCAGGGCCAGGAGATC AACCTCGCCCCGGGCTGGGCGCGCCTGTCTTTCCACGAGTCCATCGAAAAGGTGGGCGGCATCGATCCCGAGATCATCCG CGACTACGACAAGGCCAAGTCCCTGGTCGAAAAAAGCGGTGAAAAGGTGCTCAAGGGCGACAAGCTCGGCAAGGTCCAGG CCAAGCTCTTCGACATCTTCGTCGAGCCCAAGCTCATCCAGCCCCACTTCATCTACCATTATCCCACGGAAATCTCGCCG TTGTCGCGACGCAACACCGAGAACCCGGAGATCACCGACCGCTTCGAGCTCTTTATCGCCGGACGCGAAATGGCCAACGC CTTTTCCGAGCTCAACGATCCCGTGGACCAGCGCCAGCGCTTCGAGGATCAGGTGCGCGAGAAAGAGGCCGGCGACGACG AGGCCCACCGCATGGACGAGGACTACGTCCGGGCCCTGGAGTACGGGATGCCGCCGGCGGCCGGCGAAGGCATCGGCATC GACCGTCTGGTCATGCTGCTGACCGACCAGGCGTCCATCCGCGAGGTCATTCTCTTTCCGCTGCTGCGCCCCGAGGGCCA GCCGGGGTCATGA Protein sequence : MEDFRPLLESLDARDELNEVFKNRIAKAVQLLDDGVPLYPNDFAKGDDIGPVAEAHEPLTEEALAELGRTFRLAGRIVSL RSFGKVAFFTIQDASGRIQVFAERETLGQEAYTVFKKFDIGDIVGVTGRLFRTKTGELTLHADTLSLVTKSMRPLPEKYH GLKDVETRYRQRYVDLIVTPRSVEIFKARTTIIRELRAFLDSSGFMEVETPMMQAIPGGATARPFVTHHNALDMGLYMRI APELYLKRLLVGGFEKVYEVGRNFRNEGVSTRHNPEFTMCEFYWAYARYTDLMDLTERLFARLAKAVTGSEAVSYQGQEI NLAPGWARLSFHESIEKVGGIDPEIIRDYDKAKSLVEKSGEKVLKGDKLGKVQAKLFDIFVEPKLIQPHFIYHYPTEISP LSRRNTENPEITDRFELFIAGREMANAFSELNDPVDQRQRFEDQVREKEAGDDEAHRMDEDYVRALEYGMPPAAGEGIGI DRLVMLLTDQASIREVILFPLLRPEGQPGS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 9e-116 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_002955228.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 5e-116 | 51 |
