Gene Information

Name : DMR_37840 (DMR_37840)
Accession : YP_002955161.1
Strain : Desulfovibrio magneticus RS-1
Genome accession: NC_012796
Putative virulence/resistance : Virulence
Product : OmpR family two-component response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 4282347 - 4283024 bp
Length : 678 bp
Strand : +
Note : -

DNA sequence : 
ATGCGCGTACTCATCGTGGAAGACGACCTGGACGCTGCCGCCTATCTGGTCAAGGGACTCAAGGAATCGGGCTATGTGGT
GGACCATGTGGCCGACGGCCGCGAGGCCCTCTACCGCGTGGCCGCCGAGACCTACGACGCCTGCGTGGTCGACCGGATGC
TGCCCGGCGTTGACGGGCTGACCATCGTCAAGACCATGCGCTCGGCCGGCAACGCCGCCCCGGTGCTCATTCTTTCGGCC
CTGGGCGACGTGGACGACCGGGTCAAGGGCTTAAAGGCCGGCGGCGACGACTATCTGGTCAAGCCCTACGCCTTTGCCGA
GCTGCTGGCCCGGCTGGAGGCCCTGCTGCGCCGGGGCCGCTCCGACGCCCCGGACACCATGCTCAAGGTGGCCGACCTGG
AAATGGATCTGGTCGGCCGCACCGTGCGCCGGGCCGGCCGGCCCATCGAACTCAAGCCCAAGGAATTCGCCCTGCTCGAA
TACCTCATGCGCCACGCCGGCCATGTGGTCACCCGCACCATGCTGCTGGAAAACGTCTGGGACTATTCCTTCGATCCCCA
GACCAACGTCATCGACGTCCATGTGAGCCGCCTGCGCCAGAAGATCGACAAGGGCCACGACAAGCCGCTTCTCTCCACCA
TCCGCGGCGCCGGGTACAGCCTGCGTGATAGCCACTAA

Protein sequence : 
MRVLIVEDDLDAAAYLVKGLKESGYVVDHVADGREALYRVAAETYDACVVDRMLPGVDGLTIVKTMRSAGNAAPVLILSA
LGDVDDRVKGLKAGGDDYLVKPYAFAELLARLEALLRRGRSDAPDTMLKVADLEMDLVGRTVRRAGRPIELKPKEFALLE
YLMRHAGHVVTRTMLLENVWDYSFDPQTNVIDVHVSRLRQKIDKGHDKPLLSTIRGAGYSLRDSH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-40 45
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 9e-40 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DMR_37840 YP_002955161.1 OmpR family two-component response regulator BAC0347 Protein 2e-47 52
DMR_37840 YP_002955161.1 OmpR family two-component response regulator BAC0111 Protein 2e-48 51
DMR_37840 YP_002955161.1 OmpR family two-component response regulator BAC0125 Protein 1e-45 50
DMR_37840 YP_002955161.1 OmpR family two-component response regulator BAC0083 Protein 5e-46 49
DMR_37840 YP_002955161.1 OmpR family two-component response regulator BAC0308 Protein 5e-42 48
DMR_37840 YP_002955161.1 OmpR family two-component response regulator BAC0197 Protein 1e-43 48
DMR_37840 YP_002955161.1 OmpR family two-component response regulator BAC0638 Protein 2e-39 48
DMR_37840 YP_002955161.1 OmpR family two-component response regulator NC_002516.2.879194.p Protein 8e-29 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DMR_37840 YP_002955161.1 OmpR family two-component response regulator VFG0596 Protein 4e-41 45
DMR_37840 YP_002955161.1 OmpR family two-component response regulator VFG1390 Protein 1e-36 44
DMR_37840 YP_002955161.1 OmpR family two-component response regulator VFG1389 Protein 5e-33 44