Gene Information

Name : DMR_37200 (DMR_37200)
Accession : YP_002955097.1
Strain : Desulfovibrio magneticus RS-1
Genome accession: NC_012796
Putative virulence/resistance : Unknown
Product : site-specific recombinase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1961
EC number : -
Position : 4201422 - 4201967 bp
Length : 546 bp
Strand : -
Note : -

DNA sequence :
ATGATAATTGGATACGCAAGAGTTAGCACTGACAAGCAAGACCTTAGCTCCCAGATTATACGTTTAAAACAAGCTGGAGC
TGAGCGTGTCTACCAGGATGTCATGAGTGGAAAGCGCTTCGACCGTCCGGGCTTGGCCGAAATGATGGCCTTTGCGCGAG
AGGGGGATGCCCTCTGTGTGGTACGTCTTGATCGCTTGGGGCGCTCCATGCGGGAACTCCTAGAGATCATGGACCGCCTT
AAGTCTCTCAAGGTGGGTTTCAAATCCCTGGAAGAGCAACTTGACACCACGTCGGCAGCCGGTTCCTTGATCTTTCATGT
TTTTGCCGCACTGGCTGACTTTGAACGCAGCCTTCTTGCCGAGCGAACTCGTGATGGCTTGGCCGTGGCCAGGGCCAAGG
GCAACATGCCTGGTAGACCCAAGGTCGACGACGCCAAGGTCGAGCTTGCCCAACGCCTCCTGGCTGAAGGCCATTCCAAA
GCCGCAGCGGCCCGGGCCGCAGGCATCAGTCGAGCCACCTTTCTCCGTCGTCTGGCGCAACTTTAG

Protein sequence :
MIIGYARVSTDKQDLSSQIIRLKQAGAERVYQDVMSGKRFDRPGLAEMMAFAREGDALCVVRLDRLGRSMRELLEIMDRL
KSLKVGFKSLEEQLDTTSAAGSLIFHVFAALADFERSLLAERTRDGLAVARAKGNMPGRPKVDDAKVELAQRLLAEGHSK
AAAARAAGISRATFLRRLAQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
resX AGK36651.1 partial invertase/resolvase Not tested AbaR26 Protein 6e-29 55
resX ACN81037.1 partial invertase/resolvase Not tested AbaR5 Protein 9e-29 55
1_365 CAJ77091.1 Resolvase N-term Not tested AbaR1 Protein 6e-29 55
resX ADZ05753.1 invertase/resolvase Not tested AbaR10 Protein 6e-29 55
resX ADZ05809.1 invertase/resolvase Not tested AbaR20 Protein 6e-29 55
ACICU_00231 YP_001844890.1 site-specific recombinase, DNA invertase Pin protein Not tested AbaR20 Protein 9e-29 55
res AGK07012.1 resolvase Not tested SGI1 Protein 1e-29 50
res AGK07070.1 resolvase Not tested SGI1 Protein 1e-29 50
res AAK02044.1 resolvase Not tested SGI1 Protein 1e-29 50
tnpR ACD85600.1 TnpR resolvase Not tested SGI2 Protein 1e-29 50
res AGF34985.1 resolvase Not tested SGI1 Protein 1e-29 50
res AGF35025.1 resolvase Not tested SGI1 Protein 1e-29 50
res AGF35059.1 resolvase Not tested SGI1 Protein 1e-29 50
res AGK06929.1 resolvase Not tested SGI1 Protein 1e-29 50
res AGK06966.1 resolvase Not tested SGI1 Protein 1e-29 50
1_318 CAJ77076.1 Resolvase Not tested AbaR1 Protein 1e-23 47
ABTW07_3871 YP_005797119.1 resolvase IS26 Not tested AbaR4e Protein 2e-23 47
tnpR ACN81015.1 TnpR resolvase Not tested AbaR5 Protein 2e-23 47
CDBH8_0918 YP_005160010.1 transposase-like protein Not tested Not named Protein 3e-27 46
binR YP_254224.1 resolvase/integrase BinR Not tested ¥ðSh1 Protein 1e-29 45
SH1761 YP_253676.1 DNA-invertase Not tested ¥ÕSh1 Protein 3e-30 45
binL YP_254524.1 DNA-invertase Not tested ¥ðSh2 Protein 3e-30 45