Gene Information

Name : metC (DMR_37180)
Accession : YP_002955095.1
Strain : Desulfovibrio magneticus RS-1
Genome accession: NC_012796
Putative virulence/resistance : Resistance
Product : cystathionine beta-lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : -
Position : 4199132 - 4200283 bp
Length : 1152 bp
Strand : +
Note : -

DNA sequence :
ATGGACTTCACCACCCTGCTCATCCACGGCGGACAGGACCCCGACGAGCCCTACGGCGACCTGAGCCTGCCCCTGCATAC
CGCCTCCACCTTTGCCCAGGCCGATCCCGCCCGCCCCGGCCGCTTCGACTACGCCCGCAGCGGCAACCCGACCCGGCAAG
CCGTGGAGACGCACATCGCCGCTCTGGAAGGCGGGGAGCGCGGTCTGGCCTTTGCTTCGGGCATGGCCGCCATCACCAGC
GTCCTTTTGCTCTTTTCCCCGGGCGACCACATCGTGGCCGGCCGCGACCTCTACGGCGGAGCCTACCGGGTGCTGACCAC
GGTCTTCGCCCGCTGGGGCCTGGAAACGACCTTCGTGGACACCACCGACCCGGACGCCCTGGACAAGGCCATCGGCCCCC
GCACCAAGGCCGTTTACATCGAAAGCCCCTCCAATCCCCTGCTGACCGTGACCGACCTCGGGGCCGTAGCCGCCCTGGCC
AAGGCCAGGGGGGTACTCGCCATCATCGACAACACCTTCATGACGCCCTTTCTCCAACGCCCGCTCGCCCACGGCTTCGA
CATCGCCCTGCACAGCGCGACAAAATTCCTGGGCGGACACAGCGATCTCGTGGCCGGTCTGGCCGTCACGGCCGACGCGG
ACCTCGGCCGCCGGCTCTACGCCGTGCAAAACGCCTGCGGCGCGGTGCTTGGCCCCCAGGATTGCTGGCTGCTGGCCCGG
GGCATGCGCACCCTGGCCGTGCGTCTGGCCGCCGAACAGCAAACGGCGCGGCAACTGGCGACGTGGCTGGCGGCGCGGCC
CGAAGTGGCGCGCGTCCATTACCCCGGCCTGCCCGACCACCCCGGCCACGCCATCCAGGCGCGCCAGGCCGACGGCCCCG
GCGCGGTGCTCAGCTTCGAACTCGCCCACGCCCAGGCGGCCGCTACCTTCATGCGGGCCATGCGCCTGCCCAAGGTGGCG
GTCAGTCTTGGCGGCGTGGAATCCATCCTGTCCCACCCGGCGGCCATGTCCCATGCCGCCATGCCCCCGGCCGAACGGGC
GGCGCGGGGCATCACCGACGCCCTGGTCCGCCTGTCTGTCGGGCTGGAGTCGGCGGCCGATCTCCAGGAAGATCTGGACC
GAGCCCTGCGCGCGGCGGCGGACGCGGCCTGA

Protein sequence :
MDFTTLLIHGGQDPDEPYGDLSLPLHTASTFAQADPARPGRFDYARSGNPTRQAVETHIAALEGGERGLAFASGMAAITS
VLLLFSPGDHIVAGRDLYGGAYRVLTTVFARWGLETTFVDTTDPDALDKAIGPRTKAVYIESPSNPLLTVTDLGAVAALA
KARGVLAIIDNTFMTPFLQRPLAHGFDIALHSATKFLGGHSDLVAGLAVTADADLGRRLYAVQNACGAVLGPQDCWLLAR
GMRTLAVRLAAEQQTARQLATWLAARPEVARVHYPGLPDHPGHAIQARQADGPGAVLSFELAHAQAAATFMRAMRLPKVA
VSLGGVESILSHPAAMSHAAMPPAERAARGITDALVRLSVGLESAADLQEDLDRALRAAADAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 3e-77 48
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-78 48
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 5e-67 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
metC YP_002955095.1 cystathionine beta-lyase BAC0207 Protein 2e-56 43