Gene Information

Name : metC (DMR_37170)
Accession : YP_002955094.1
Strain : Desulfovibrio magneticus RS-1
Genome accession: NC_012796
Putative virulence/resistance : Resistance
Product : cystathionine beta-lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : -
Position : 4197967 - 4199097 bp
Length : 1131 bp
Strand : +
Note : -

DNA sequence :
ATGCGTCTCGAAACCTGTCTGGCCCAATGCGGTTCCCGCTGGGATGACCGCACAGGGGCCGTGTCCATGCCGATCTATCA
GACCGCCACCTTCCGCCATCCGGGCCTGGGGCAGTCCACGGGTTATGACTATACCAGGACCGCCAATCCCACCCGCGACG
TCCTGCAGGAAACCCTGGCCCTTGCCGACGGCGGCTGCCAGGCCCTGGCCTTCGCCTCGGGCATGGCCGCCCTGGACTGC
CTGTGCCGCCTGTTCGCCCCGGGCGACCGGATCGTCGTCACCGAGGATCTCTACGGCGGCACCTACCGGCTCTTTGAGCG
CCTGCAACGCCCGCTGGGCATCGAGGCCGTCTACGTGGACACGGCCGACACGCCCAGCGTGGCCGCGGCCCTCGCCTCCG
GGGCCAGGGCGCTTTTGGTCGAAAGTCCGACCAATCCCCTGCTCAAGGTGACCGACCTGGCGGCCCTTGGCCGGCTTGCC
CGGGAGCATGGAGCGCTTTTTTTCGTGGACAACACCTTCATGACGCCCCTGCTCCAGCGCCCGCTGGAGCTCGGCGCCGA
CGTGGCCGTCTATAGCGCCACCAAGTATCTCGGCGGCCATGACGACGTGGTGGCCGGCATCCTGGTGGCCAAGGCCCCGG
AGCTGGCCGAGCGGCTGGCCTTTTTCCACAATGCCGCCGGGGCCGGGCTGGGGCCGCTGGACAGCTGGCTGGTCCTGCGC
GGGCTGAAAACCCTGGGCGTACGCCTGGCCCGACAGCAGGCCTCGGCCCGGGTCGTGGCCGATTTCCTGGCCAACCATCC
GGCCGTGGCCCGCGTCCATTACCCGGGCCGGCCCGACCATCCCGGACACGCCCGCCAGCAACGGCAGGCCGCCGGCTTCG
GGGCCATGGTCTCCTTCGAGCTGGCCGAGCCGTCCCGGGCGGGCGAAATCCTGGCCCGGGCGCGGCTGTTTCTGTTCGCC
GAAAGCCTGGGCGGCGTGGAGTCCCTCATCACGCTTCCCGCCGTACAGACCCATGCCGACATCGACCCGCGAACCCGGGC
CAGGCTCGGCGTCACGGACGGCCTGCTGCGCCTGTCCATCGGCCTGGAAGACCCCGGCGACCTTGTGGCCGATCTGCAGG
CGATGCTGTGA

Protein sequence :
MRLETCLAQCGSRWDDRTGAVSMPIYQTATFRHPGLGQSTGYDYTRTANPTRDVLQETLALADGGCQALAFASGMAALDC
LCRLFAPGDRIVVTEDLYGGTYRLFERLQRPLGIEAVYVDTADTPSVAAALASGARALLVESPTNPLLKVTDLAALGRLA
REHGALFFVDNTFMTPLLQRPLELGADVAVYSATKYLGGHDDVVAGILVAKAPELAERLAFFHNAAGAGLGPLDSWLVLR
GLKTLGVRLARQQASARVVADFLANHPAVARVHYPGRPDHPGHARQQRQAAGFGAMVSFELAEPSRAGEILARARLFLFA
ESLGGVESLITLPAVQTHADIDPRTRARLGVTDGLLRLSIGLEDPGDLVADLQAML

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 1e-72 45
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-71 45
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 5e-58 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
metC YP_002955094.1 cystathionine beta-lyase BAC0207 Protein 7e-52 42