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Name : DMR_35790 (DMR_35790) Accession : YP_002954956.1 Strain : Desulfovibrio magneticus RS-1 Genome accession: NC_012796 Putative virulence/resistance : Virulence Product : UDP-glucose/GDP-mannose dehydrogenase family protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0677 EC number : - Position : 4050111 - 4051424 bp Length : 1314 bp Strand : + Note : - DNA sequence : TTGATCAGTTTTGAGGATATTCGCGCCAAAAAGGCCCCGGTGGCCGTTATCGGCCTCGGGTATGTCGGCCTGCCCCTGGC CGTGGCCCTGGCCCGCCATTTCGACGTGGTCGGTTTCGACGTCAAGGCCGCCCGGGTGGCCGAACTGCAGGCCGGCCGGG ACAGCACGCTGGAAGTCTCGCCCGAGGAGATGGCCGAGGTCAGCCTGCGCTATACCTGCGATCCGGCCGATCTGACCGCC TGCAAGGTCTTCATCGTGGCCGTGCCCACGCCCATTAACGCCAACCGCGTGCCCGACCTCGGCCCGCTGGTCGGCGCGTC GCGGCTTTTGGGCCAGCACATCGGCGAAGGATCGGTGGTGGTCTACGAGTCCACGGTCTACCCGGGACTGACCGAGGAAG TCTGCGTGCCGCTTTTGGAAAAAGGTTCGGGCCTGTCCTGCGGCAAGGACTTTTTCGTGGGCTATTCGCCTGAGCGCATC AATCCCGGCGATAAGGTCCATACGCTTTCCACCGTGGTCAAGGTCGTGGCCGGCCAGACCCCGGAAGTGACCGATCTGCT GGCCGACCTGTACGGCTCGGTGGTCACGGCCGGCATCCACAAGGCCCCGTCCATCAAGGTGGCCGAGGCGGCCAAGGTCA TCGAGAATACTCAGCGCGACATCAACATCGCGCTGATGAACGAGCTGTCGCTTATTTGCGAGCGCCTGGACATCGACACC GTCGACGTGCTTCGCGCCGCTGAAACGAAATGGAACTTCCTGCCGTTTCGCCCGGGGCTTGTGGGCGGCCACTGCATCGG CGTCGACCCCTACTATCTGCTCTACAAGGCCCAGAGCCTCAATCTGCATCCCCAGGTGATCCCGGCCGGCCGGCGCATCA ACGACTCCATGGGCAAACATATCGCCGAAGTCGCCATCAAGATGCTCATCCGCTCCGAGTGCCGGGCCAGCTGCGCCCGC ATCGGCGTGCTGGGACTCACCTTCAAGGAAAACGTGCCGGATCTGCGCAACACCAAGGTCGTGGACATCATCCGCGAGCT GGGCGATTTCCGCATGCACGTCCTGGTCCACGACCCCATGGCCTCCTCCGAGGAAGCCCTGGAGGAATACGGCCTGCCCC TGGTCGGCCAGGAAGAGCTGCGCGACCTTGACGCGCTGATTATCGCCGTCAACCACGACGCCTTCAAGGCGTTGTCCCTG GAAGAGCTGGCCACTTGGTTTCGGCCCACGGCCACGCCCATCCTCATCGACGTCAAGGGCATCCACGAACGCGCCGCGTC CGAGGCGGCCGGCTTCCGCTACTGGCGGCTGTAG Protein sequence : MISFEDIRAKKAPVAVIGLGYVGLPLAVALARHFDVVGFDVKAARVAELQAGRDSTLEVSPEEMAEVSLRYTCDPADLTA CKVFIVAVPTPINANRVPDLGPLVGASRLLGQHIGEGSVVVYESTVYPGLTEEVCVPLLEKGSGLSCGKDFFVGYSPERI NPGDKVHTLSTVVKVVAGQTPEVTDLLADLYGSVVTAGIHKAPSIKVAEAAKVIENTQRDINIALMNELSLICERLDIDT VDVLRAAETKWNFLPFRPGLVGGHCIGVDPYYLLYKAQSLNLHPQVIPAGRRINDSMGKHIAEVAIKMLIRSECRASCAR IGVLGLTFKENVPDLRNTKVVDIIRELGDFRMHVLVHDPMASSEEALEEYGLPLVGQEELRDLDALIIAVNHDAFKALSL EELATWFRPTATPILIDVKGIHERAASEAAGFRYWRL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 8e-107 | 55 |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 8e-97 | 50 |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 8e-97 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| DMR_35790 | YP_002954956.1 | UDP-glucose/GDP-mannose dehydrogenase family protein | VFG0431 | Protein | 3e-97 | 50 |
