Gene Information

Name : DMR_31690 (DMR_31690)
Accession : YP_002954546.1
Strain : Desulfovibrio magneticus RS-1
Genome accession: NC_012796
Putative virulence/resistance : Virulence
Product : fis family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2204
EC number : -
Position : 3590161 - 3591174 bp
Length : 1014 bp
Strand : -
Note : -

DNA sequence : 
ATGGAACTGAACCTTTCCGGCATGGTCGGGCAGAGTGCTTGCCTTGCCGAGGTCCTGCGCGTGCTGGCCAAGGTGGCCCC
CACCGACTCCACGGTGCTGGTCACGGGCGAATCCGGCACGGGCAAGGAACTGCTCGTGCGGGCGTTGCACGCCAACAGCC
GCCGGGCCGGCAAGCCCTTCGTGCCGGTCAACTGTGGGGCCATCCCGCGCGAACTCCTGGAATCCGAGCTTTTCGGCCAC
GAAAAGGGGGCGTTTACCTCGGCCGTGCGCACGCGGCAGGGGCGGTTCGAACTGGCCGAGGGCGGCACGATTTTTCTCGA
CGAAATCGGCGAGATGGACTTGAGCCTGCAGGTGAAAATCCTGCGGGCGCTCCAGGAGAAAGAGTACGAACGCGTCGGCG
GCGACAAGACCCTCAAGGCTGACGTGCGCATCGTGGCCGCCACCAACCGCGACCTGGAAACCGAGGTGGCGGCGGGGCGG
TTTCGCGAAGACCTTTACTACCGTTTAAACGTCATCCCGCTCCATCTGCCGCCGCTACGCGAACGCGGCCAGGACATCCT
GCTTTTGGCCGACTATTTCCTGGGCCGTTTCTGCCGCCAGAAAAGCCGGCCCACCTTGACGTTTTCGCCCGAGGCCCGGG
GGCTGGTGCTGGGCTATCCCTGGCCGGGCAACGTGCGTGAGCTGGAAAACTTCATGGAGCGCCTGTCCATCCTGTGCGAC
AGCGAGGTGGTGGGCATTGAGGACCTGCCGCGCAAGATTCTCGACCATGCCGGCGTGGCCCCGCCGCCACCGCCGGTCGC
TCTGGCCGAGGCCGGCTTCCGCTGGCCGACCCTGGCCGATCTGGCCGAGAAATCCATGGGACTCAAGGACTTCATGGACA
CCCTGGAGGAAAAGCTCCTCATCGAGGCCCTGGGCAAGGCCTCGGGGGTGAAAAACCAGGCGGCGGAACTGCTCGGCATC
AAACGCACGACGCTGATTGAAAAGCTCAAAAAGCGCAACATGGCCGGCGATTGA

Protein sequence : 
MELNLSGMVGQSACLAEVLRVLAKVAPTDSTVLVTGESGTGKELLVRALHANSRRAGKPFVPVNCGAIPRELLESELFGH
EKGAFTSAVRTRQGRFELAEGGTIFLDEIGEMDLSLQVKILRALQEKEYERVGGDKTLKADVRIVAATNRDLETEVAAGR
FREDLYYRLNVIPLHLPPLRERGQDILLLADYFLGRFCRQKSRPTLTFSPEARGLVLGYPWPGNVRELENFMERLSILCD
SEVVGIEDLPRKILDHAGVAPPPPPVALAEAGFRWPTLADLAEKSMGLKDFMDTLEEKLLIEALGKASGVKNQAAELLGI
KRTTLIEKLKKRNMAGD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrpS AAT96161.1 HrpS Virulence T-PAI Protein 6e-38 44
hrpS AAT96215.1 HrpS Virulence T-PAI Protein 6e-38 44
hrpS AAD24684.1 sigma-54-dependent enhancer-binding protein HrpS Virulence Hrp PAI Protein 2e-35 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DMR_31690 YP_002954546.1 fis family transcriptional regulator BAC0467 Protein 7e-68 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DMR_31690 YP_002954546.1 fis family transcriptional regulator VFG1214 Protein 2e-58 42