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Name : clpB (DMR_30670) Accession : YP_002954444.1 Strain : Desulfovibrio magneticus RS-1 Genome accession: NC_012796 Putative virulence/resistance : Virulence Product : chaperone ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 3469936 - 3472536 bp Length : 2601 bp Strand : - Note : - DNA sequence : ATGGATCTCAACAAGTTTACGCAAAAGTCGCAGCAAGCCATCGGCGAGGCCCAGGCCGTCGCCGTTCGCATGGGCCAACA GCAGGTCGACGCCGAGCACCTGCTCTATGCCCTGTTGACCCAGGACCAGGGGCTGGTGCCCCGCATCCTGGACAAGGCCG GCTACAACAGCCAGGCCTATCTGGCCGAGCTGGAACGCGGGCTGTCCCGCCTGCCCAAGGTCAGCGGCCCGGGCGCGCAG CCGGGGCAGGTCTACGTGACCCCGCGCCTCAACGAAATTCTGGTCAAGGGCCAGGATCTGGCCCGCCACCTCAAGGATGA ATACGTCAGCGTGGAACACCTGTTCCTCGCTTTTTGCGACGAGGGGCCGTCCACCCTGGCCGGCCAGGTGAACAAGGCGC TTGGTATCGATAAGAACCGCATCCTGGCCGCTCTGACCGAGATACGCGGCGGCCAGCGCGTCACCTCGGCCGACCCCGAA GCCACCTACGAGGCCCTGACCAAGTACGGCCGCGATCTGGTGGACGCCGCCAGAAAGGGCAAGATCGATCCGGTCATCGG CCGCGACGAGGAGATTCGCCGCGTCATCCGCATCCTGTCGCGCCGCACCAAGAACAATCCCGTGGTCATCGGCGAGGCGG GCGTGGGCAAGACGGCCATCGTCGAAGGCTTGGCCATGCGCATCGTCAACAAGGACGTGCCCGAGGGCCTCAAGGAAAAG ACCATCTTCGCCCTCGACATGGGCGCGCTTATTGCCGGGGCCAAGTACCGGGGCGAATTTGAGGAACGCCTCAAGGCCGT GCTCAAGGAAGTGCAGAGCTCCGAAGGCCGGGTCATCCTGTTTATCGACGAACTGCATACCATCGTCGGCGCGGGCAAGA CCGAAGGCTCCATGGACGCGGGCAACCTGCTCAAGCCCATGCTGGCCCGGGGCGAACTGCACTGCATCGGCGCCACGACC CTGGACGAGTATCGCAAGTACATCGAAAAGGACCCGGCCCTGGAGCGGCGCTTCCAGCCGGTCTTTGTCGACGAGCCGAC GGTGGAGGACACCATCTCTATCCTGCGTGGCCTTCGCGAGCGCTTCGAGGTGCACCACGGCGTGCGCATCAATGACTCAT CCCTGGTCGAGGCGGCGGTGCTGTCCCAGCGCTACCTGCCCGACCGGCAGTTGCCGGACAAGGCCATCGACCTCATCGAC GAGGCCGCAGCCATGATCCGCACCGAGATCGATTCGCTGCCGGCCGAGCTCGACCAGATCAACCGCAAGGTCATGCAGCT GGAAATCGAGCGCGAGGCGCTTCGGCGCGAAACCGACAAGGCCTCCCGCGAGCGCCTGGAAAAGCTTGAGGAAGAGCTGG CCAATTTGAAGGAAAGCCAGGCCAGCTTCATGACCCAGTGGGAAAAGGAGAAGGGGGCCGTGGAGGTCCTGCGGCGCGTC AAGGAAGACATCGAAAAGACCAAGCTGGCTATCGAGGAGGCCGAGCGCGCCTACGACCTCAACAAGGCGGCCGAGCTGCG CTACGGTCGCCTGGCCGGTCTGGAGCGCGATCTGGCCGGCCAGGAAGCGGCCATCGCCAAGGCGGCCGGCGGCACGCGGC TTATCCGCGAGGAAGTCGCCCCGGACGACATCGCCATGGTCATCTCGCGTTGGACCGGCATCCCGGTGACGCGGCTGCTG GAAAGCGAGCGCGAGAAACTTCTGCGCCTGGGAGAGGTGCTCCATGACCGGGTGGTGGGCCAGGACGAGGCGGTCACGGC CGTGGCCGACGCCGTGCTGCGCGCCCGGGCGGGGCTGAAGGACCCCGGCCGGCCCATCGGGTCATTCATCTTCCTTGGCC CCACGGGCGTGGGCAAGACCGAGCTGTGCAAGACCCTGGCCGCGGCGCTTTTCGACACCGAGGACAACATCGTGCGCCTG GACATGTCGGAATACATGGAGCGCCACACCGTGGCCCGGCTCATCGGCGCGCCTCCGGGGTACATCGGCTACGACGAGGG CGGCCAGCTCACCGAGGCCGTGCGCCGCAAGCCCTACAGCGTGGTGCTCTTTGACGAGATCGAAAAGGCCCACAGCGATG TGTTCAACGCGTTGCTGCAAATCCTCGATGACGGCCGGCTCACCGACAGCCATGGCCGCACCGTGGATTTCAAGAACACG ATCATCATCATGACCTCCAACCTCGGGGCCCAGTACATGCTCGACGGCATCCTGCCCTCGGGCGAGTTCAAGGAAGGCGT GTCCGAGTCGGTCATGAACACCTTGCGCGGGCACTTCCGGCCGGAGTTCCTCAATCGCGTGGACGAGGTCGTGCTCTTCA AGCCGCTGTTGCGCGAACAGATCGCCGCCATCGTGGAACTCATGCTCGGCGGGCTGCGCGCCCGTCTGGCCGACCGCAAG ATCAGCCTGGCGCTGTCCGACGCGGCCAAGGCGTTTATCGCCGAGACGGCCTACGATCCGGTCTTCGGGGCGCGGCCGCT TAGGCGCTATTTGCAGGCCCACATCGAAACGCCCCTGGCCAAGGCCCTCATCGGCGGCCAGGTGTCGGACGGCCAGACCG TCACGGTGGACATGCAGGACGGGGCGCTGGTCTTCGTCTAG Protein sequence : MDLNKFTQKSQQAIGEAQAVAVRMGQQQVDAEHLLYALLTQDQGLVPRILDKAGYNSQAYLAELERGLSRLPKVSGPGAQ PGQVYVTPRLNEILVKGQDLARHLKDEYVSVEHLFLAFCDEGPSTLAGQVNKALGIDKNRILAALTEIRGGQRVTSADPE ATYEALTKYGRDLVDAARKGKIDPVIGRDEEIRRVIRILSRRTKNNPVVIGEAGVGKTAIVEGLAMRIVNKDVPEGLKEK TIFALDMGALIAGAKYRGEFEERLKAVLKEVQSSEGRVILFIDELHTIVGAGKTEGSMDAGNLLKPMLARGELHCIGATT LDEYRKYIEKDPALERRFQPVFVDEPTVEDTISILRGLRERFEVHHGVRINDSSLVEAAVLSQRYLPDRQLPDKAIDLID EAAAMIRTEIDSLPAELDQINRKVMQLEIEREALRRETDKASRERLEKLEEELANLKESQASFMTQWEKEKGAVEVLRRV KEDIEKTKLAIEEAERAYDLNKAAELRYGRLAGLERDLAGQEAAIAKAAGGTRLIREEVAPDDIAMVISRWTGIPVTRLL ESEREKLLRLGEVLHDRVVGQDEAVTAVADAVLRARAGLKDPGRPIGSFIFLGPTGVGKTELCKTLAAALFDTEDNIVRL DMSEYMERHTVARLIGAPPGYIGYDEGGQLTEAVRRKPYSVVLFDEIEKAHSDVFNALLQILDDGRLTDSHGRTVDFKNT IIIMTSNLGAQYMLDGILPSGEFKEGVSESVMNTLRGHFRPEFLNRVDEVVLFKPLLREQIAAIVELMLGGLRARLADRK ISLALSDAAKAFIAETAYDPVFGARPLRRYLQAHIETPLAKALIGGQVSDGQTVTVDMQDGALVFV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 2e-99 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_002954444.1 | chaperone ClpB | VFG2076 | Protein | 2e-112 | 44 |
| clpB | YP_002954444.1 | chaperone ClpB | VFG2084 | Protein | 2e-104 | 42 |
